PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HB-other | ||||||||
Protein Properties | Length: 151aa MW: 16902.9 Da PI: 9.2147 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 43.7 | 4.8e-14 | 4 | 44 | 12 | 52 |
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++L + F++n+yp+++++e LA++lg+ +qV+ WF N R PCP003121.1 4 IKRLSKSFKENHYPDRSMKESLAQELGIMAKQVSKWFENAR 44 789************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MNIIKRLSKS FKENHYPDRS MKESLAQELG IMAKQVSKWF ENARHCLKVS VDKSAAGNGT 60 PLPQTNGKQL EQDGTTFGAQ NKELPRTDDP MTGSCSGDVK DSELVTPKSS KQKAITPNNR 120 KRERQSDDLD PENETPETNR KAPVFSPVFH M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 2e-09 | HB-PHD family protein |