PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002951.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 286aa    MW: 32329.8 Da    PI: 8.559
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002951.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed+ l ++++ +G g W+  +++ g++R++k+c++rw++yl
      PCP002951.1 15 RGAWTAMEDKVLTEYIRNHGEGKWRNLPKRAGLRRCGKSCRLRWLNYL 62
                     89********************************************97 PP
2Myb_DNA-binding51.81.9e-1668111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
      PCP002951.1  68 RGNITRDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 111
                      7899******************.*********.***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRSPCCSKD EGLNRGAWTA MEDKVLTEYI RNHGEGKWRN LPKRAGLRRC GKSCRLRWLN  60
YLRPDIKRGN ITRDEEELII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TTIGKRIQVE  120
GRLCSDGNRR PTQEKPKPTL SPKPCTNISC TKVVRTKASR CTKVVLPHES QKFGHSTKQV  180
VNAAPILDQA MNNPMVGIDE PLLPMSFLDD ENNNSCEFLV DFKMDENFLS DFLNVDFSVL  240
YNNEGAGKAA AAATTEDTSN KLHGPDLRSS MAPIIESELD CWLVDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.14e-61MYB family protein