PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002596.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 600aa    MW: 65114.4 Da    PI: 9.0741
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002596.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.78.7e-13226324196
                  EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
           B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                  f+k+ t  d++ + +rl++pk+ ae+h   + +++   + ++d++gr+W++++  ++++ +  yvl+ G +++   n+ ++gD v F+++  se++l 
  PCP002596.1 226 FEKTITATDTHPNnARLIIPKRAAEAHfpAIREKQRLPIAMRDSTGREWRFTYVCWRNGMTvmYVLE-GLNGYMLINQWRAGDKVAFHRIV-SEGKLQ 321
                  677777777765559**************555556667***************88888888767777.********************775.777777 PP

                  EEE CS
           B3  94 vkv 96 
                  ++ 
  PCP002596.1 322 IRT 324
                  765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MENFVKPFTL ARMDGHCIVG ALYRATCTPN SISEESGAQN VLMHLSFSQE NVMNNRVITD  60
SSQSSIFLAA GASNRRYPAP APAPSPAPAP APSPAPALAA GASNRRYPAP APAPSPAPSP  120
APAPSPSPAS APASASAPSP VSPCAPSPAS PCAPSPASPC APSPTSAPAP PPAPVTDGED  180
VSSQIPRVDA STESHLHPQN LPRTTSNEQQ LPEISGNSSS EVILLFEKTI TATDTHPNNA  240
RLIIPKRAAE AHFPAIREKQ RLPIAMRDST GREWRFTYVC WRNGMTVMYV LEGLNGYMLI  300
NQWRAGDKVA FHRIVSEGKL QIRTIKAASS DSPALAKSVG ITLIPTLFSF VKLVSTIRTL  360
SFDQASLSNM RSKGSHNTQN DTPLALSARV PIFNIDILDK ERVTHQYVDQ HETSLNPAAS  420
TRSRRNGGRH LFVEGVEGSK AVYHNCGDFL RQRQEKPSHI SSKINDPKVS KRLGPLPQPR  480
PATNLGKEQQ VPKEHEGIED SEVFRQTRPK SQYCESKEKP HTLDQTSLLP RSDGNLRKKA  540
PEIECLHSAD DLYTIRHKPN ESLCKYADRF NHEYSRCAEA DDKIALNASR RAYMTVSLST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.13e-25B3 family protein