PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002437.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 483aa MW: 53739.4 Da PI: 5.3641

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002437.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.2	7.4e-35	16	106	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d++++e++sws+n++sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +++k+ll++i+ PCP002437.1 16 FLLKTYNMVDDSSTDEIVSWSSNKKSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKSDPER---------WEFANEDFIQDQKHLLKNIH 103 9************************************************************99988.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PCP002437.1 104 RRK 106 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEGGSTAGGG GGPAPFLLKT YNMVDDSSTD EIVSWSSNKK SFVVWNPPEF ARVLLPTYFK 60 HNNFSSFIRQ LNTYGFRKSD PERWEFANED FIQDQKHLLK NIHRRKPIHS HSNPQGSMVD 120 PERAALDDEI EKLSHDKAAL EASISTFKQQ RSAAKLQLEN LAQRVSGMEQ RQKNLLTFLD 180 EAVHNPNFIE HLSRKIESMD FSAYNKKRRL PDIENLQPVV ENGFVDNQSS SISEFGNVFH 240 QDFSSKLRLE LSPAVSDMNL VSLSTQSSNE DGGSSTRKIS EELKGAQMRT EGLLFAPETL 300 ELSDTGTSFA FKMDSLLSRK APTVGSPIRH SLQPGLPSNE EGDGHISCQL NLTLASTPSQ 360 VNNSPYSAAV TQVGQDINKS AASELHDKGK EPDLRAFTNK NLADDDKPKT SSQEATHNNQ 420 APALVPVRVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRFGHG MSRTVKDAET 480 LTL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEGGSTAGGG GGPAPFLLKT YNMVDDSSTD EIVSWSSNKK SFVVWNPPEF ARVLLPTYFK  60
HNNFSSFIRQ LNTYGFRKSD PERWEFANED FIQDQKHLLK NIHRRKPIHS HSNPQGSMVD  120
PERAALDDEI EKLSHDKAAL EASISTFKQQ RSAAKLQLEN LAQRVSGMEQ RQKNLLTFLD  180
EAVHNPNFIE HLSRKIESMD FSAYNKKRRL PDIENLQPVV ENGFVDNQSS SISEFGNVFH  240
QDFSSKLRLE LSPAVSDMNL VSLSTQSSNE DGGSSTRKIS EELKGAQMRT EGLLFAPETL  300
ELSDTGTSFA FKMDSLLSRK APTVGSPIRH SLQPGLPSNE EGDGHISCQL NLTLASTPSQ  360
VNNSPYSAAV TQVGQDINKS AASELHDKGK EPDLRAFTNK NLADDDKPKT SSQEATHNNQ  420
APALVPVRVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRFGHG MSRTVKDAET  480
LTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-165	HSF family protein