PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002039.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 487aa MW: 55108.9 Da PI: 7.4969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002039.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	86.3	2.8e-27	169	228	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ p +YY+C++a +Cpvkkkv++sae+p +++ tYegeHnh PCP002039.1 169 VNDGYQWRKYGQKVTRDNPSPTAYYKCSFApSCPVKKKVQKSAENPCLLVATYEGEHNHM 228 58*************************99**************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MDSTRVNTSL GLNLVPFCRA NDHRAPATMQ QEFEGGCAQL QGNALVKEEA ASHHDVLAEE 60 LNRVSVENKK LTEVLTALCE NYNTLQSHVR ELMTTQQQQN NTSDIYRKRK ADSEDYNNVI 120 GLINPGTNTD TSSISDDKEY SCKRLKENTN LKISRVYVHT DASDTGLIVN DGYQWRKYGQ 180 KVTRDNPSPT AYYKCSFAPS CPVKKKVQKS AENPCLLVAT YEGEHNHMHP GKRAEVTLIA 240 PVSPKQNHQL ITSPISVLPS VAKRSAAPTF LCDDNRRSPN SAMYSQETQA PAFQQFLVQQ 300 MASSLTKDPD FTSAVAAAIS GRISDHTMAR KWMLWEIDEQ VKELFKQGEE MFNLQVGENE 360 MEEDEDEKRR KRDDEARSQR ASHSCQVIQV VAQISRPSRS AKIDRSRQRQ GTDLLDDYFV 420 RNNAFPDTYF RCCFRMERHL FNKITIAGCN HDSYFVQKND AFGVMGLIPK QKIIVALRML 480 AYGVSAD

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MDSTRVNTSL GLNLVPFCRA NDHRAPATMQ QEFEGGCAQL QGNALVKEEA ASHHDVLAEE  60
LNRVSVENKK LTEVLTALCE NYNTLQSHVR ELMTTQQQQN NTSDIYRKRK ADSEDYNNVI  120
GLINPGTNTD TSSISDDKEY SCKRLKENTN LKISRVYVHT DASDTGLIVN DGYQWRKYGQ  180
KVTRDNPSPT AYYKCSFAPS CPVKKKVQKS AENPCLLVAT YEGEHNHMHP GKRAEVTLIA  240
PVSPKQNHQL ITSPISVLPS VAKRSAAPTF LCDDNRRSPN SAMYSQETQA PAFQQFLVQQ  300
MASSLTKDPD FTSAVAAAIS GRISDHTMAR KWMLWEIDEQ VKELFKQGEE MFNLQVGENE  360
MEEDEDEKRR KRDDEARSQR ASHSCQVIQV VAQISRPSRS AKIDRSRQRQ GTDLLDDYFV  420
RNNAFPDTYF RCCFRMERHL FNKITIAGCN HDSYFVQKND AFGVMGLIPK QKIIVALRML  480
AYGVSAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31800.1	2e-67	WRKY family protein