PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002012.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 475aa    MW: 53770.1 Da    PI: 5.1459
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00055165181117
                  EEETTTTEEESSHHHHH CS
      zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                  y+Cp+Cgk+++  + L+
  PCP002012.1 165 YVCPNCGKRYNALDALQ 181
                  9**********999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MSIEPFNKLV KLTARAFYDD IPTKGENQPK TGRSDNRGIA VVVLDALSRC FDARRQWVRE  60
EDLAKDLKLH SKQLRRTLRF FEEEKLVTRD HRRETAKGAK VHNAAVAASG DVPPVKEGEE  120
KVKMHTHSYC CLDYAQIYDV VRYRLHRLRK KLKDELEDKN TVQEYVCPNC GKRYNALDAL  180
QLVSMEDEYF HCESCNGELV AESDKLASQE VVGDGDDNAR RRRREKLKDL LQKMEVQLKP  240
LMDQINRVKD LSPPEFGSLQ AWEARASAAR RAENGESSAM DPSKSSHGMG YGGTPMPFLG  300
DTKVEVDFSG VEGKGKDIKS EADGTSLKVL PPWMIKQGMN LTKEQRGEVK QEQKMDAIGS  360
VAAPEFSEDK KFSTENNEKN IQDEYLKAYY AALIKRQQEE EAKKAQETQI SDGPSAMSPN  420
RRVGMKSKRE DEGEGNVDWE EAPVTGNAEN YKVHDLNVEA DAIADDEDDI DWEEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220226RRRRREK
2221227RRRRREK