PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001915.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 349aa MW: 38139.2 Da PI: 6.4132

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001915.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.6	2.3e-34	20	137	2	99
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................ssssasec.eaes 77 +g+kdrhski+T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ s+++++++ a++ PCP001915.1 20 TGRKDRHSKIYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLVELppwhpittsnhaaeaddpfrsSNPNPNDMaIAAA 117 79**************************************************************8888877766666666655532222223321111 PP TCP 78 ssssasnsssgkaaksaakskk 99 +++s+s ss+ + +++ ++++ PCP001915.1 118 EQQSES--SSSYNFNFELQRQR 137 111111..11111122211111 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEGCGGEIVE VQGGHIVRST GRKDRHSKIY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSSIDKL VELPPWHPIT TSNHAAEADD PFRSSNPNPN DMAIAAAEQQ 120 SESSSSYNFN FELQRQRQSD NDSNFNIPPS LDSDNIADTM KSFFPTNTSS NAAAASSVDD 180 FRSYPTDPHL ISATTQDLGL SLHSFQDQGL NIHHNHTHSH TQQPSQALFA AAAATGFDSS 240 SYQRMVAWSN ENRGLDGGFV FNSHSHSYAQ PQPHNHGGDG NHGSTLQSSF TPSVSTRAWQ 300 QQHSSIFGTC FGTSDGTSPA FCIQGEEAEN GVISDRPSST SSLNSTRQL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEGCGGEIVE VQGGHIVRST GRKDRHSKIY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI KKAKSSIDKL VELPPWHPIT TSNHAAEADD PFRSSNPNPN DMAIAAAEQQ  120
SESSSSYNFN FELQRQRQSD NDSNFNIPPS LDSDNIADTM KSFFPTNTSS NAAAASSVDD  180
FRSYPTDPHL ISATTQDLGL SLHSFQDQGL NIHHNHTHSH TQQPSQALFA AAAATGFDSS  240
SYQRMVAWSN ENRGLDGGFV FNSHSHSYAQ PQPHNHGGDG NHGSTLQSSF TPSVSTRAWQ  300
QQHSSIFGTC FGTSDGTSPA FCIQGEEAEN GVISDRPSST SSLNSTRQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	8e-62	TCP family protein