PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001819.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 291aa MW: 32678.1 Da PI: 6.6012

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001819.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.3e-06	123	142	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C+k+F+r n++ H+ PCP001819.1 123 FSCPVCSKTFNRYNNMQMHM 142 89*****************9 PP
2	zf-C2H2	13.9	0.00016	208	230	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ PCP001819.1 208 FGCRKCGKPFAVRGDWRTHEKNC 230 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MQTPFTTTTI DEDFQDEDSI FLSLGPPGQD VPKQYHLIYN NQSSSSTQPD HHRTFYHDYP 60 NPNPDPEDGT VTVALNIGPP SGGGGRPSSS SFSNPNHNHI GGPVEGQYWI PSPAQILVGP 120 TQFSCPVCSK TFNRYNNMQM HMWGHGSQYR KGPESLRGTK PASSVLRLPC YCCAEGCKNN 180 IEHPRSRPLK DFRTLQTHYK RKHGTKPFGC RKCGKPFAVR GDWRTHEKNC GKLWFCICGS 240 DFKHKRSLKD HVSAFGDGHA PYGVELCTEP EEEDHVDDEE DDNNDDDLVI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-115	C2H2 family protein