PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001818.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 377aa MW: 41562.2 Da PI: 7.725

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001818.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.5e-32	211	266	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PCP001818.1 211 KQRRNWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 266 79****************************************************97 PP
2	Myb_DNA-binding	44.1	4.8e-14	213	264	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ PCP001818.1 213 RRNWSPELHRRFLHALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKYR 264 679***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MECTKEMQAS AKLGFREYVK ALEEERHKIQ VFQRELPLCL ELVTQAIERC KQQISDTTAD 60 YLHGQSECSE QTSSEGHVFE EFIPLKRISS SDSDEDEVRE SQEAKDNEKD DKIAGDDRKK 120 PDWLRSVQLW NTTPDAPLKE ELPRKALVME VKRNGGAFQP FQREKSIGKT NGPVAKEPYS 180 APATSSTTDT ASGGSGGSNK KEEKDGQGQR KQRRNWSPEL HRRFLHALQQ LGGSHAATPK 240 QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPTMHGNSNS SAPAPQFVVV GGIWVPPQEY 300 AAMAATTASG EAANGIYAPL ASTPPAVTQV SPPIQRPRPK QPKPFHSDEG VSHSEGRGHS 360 NSTATSSSTH TPASPVV

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MECTKEMQAS AKLGFREYVK ALEEERHKIQ VFQRELPLCL ELVTQAIERC KQQISDTTAD  60
YLHGQSECSE QTSSEGHVFE EFIPLKRISS SDSDEDEVRE SQEAKDNEKD DKIAGDDRKK  120
PDWLRSVQLW NTTPDAPLKE ELPRKALVME VKRNGGAFQP FQREKSIGKT NGPVAKEPYS  180
APATSSTTDT ASGGSGGSNK KEEKDGQGQR KQRRNWSPEL HRRFLHALQQ LGGSHAATPK  240
QIRELMKVDG LTNDEVKSHL QKYRLHTRRP TPTMHGNSNS SAPAPQFVVV GGIWVPPQEY  300
AAMAATTASG EAANGIYAPL ASTPPAVTQV SPPIQRPRPK QPKPFHSDEG VSHSEGRGHS  360
NSTATSSSTH TPASPVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-95	G2-like family protein