PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 27656.7 Da PI: 9.3903 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 106.6 | 1.2e-33 | 2 | 102 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ + ++ +l++ PCP001553.1 2 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERLRAHTDRLFI 97 99***************************7666..6679************************************************99888899*** PP EEE-S CS B3 95 kvfrk 99 +++r+ PCP001553.1 98 GWRRR 102 ***98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MFEKPLTPSD VGKLNRLVIP KQHAEKYFPL GGGDSGLLLS FEDESGKSWR FRYSYWNSSQ 60 SYVLTKGWSR YVKEKRLDAG DVVLFERLRA HTDRLFIGWR RRNAVPAHDS GAQVSRGGVE 120 SSSGGGGGWT RMLYSAPHHG SSYPAHQHHH SVAPYPPDCL HAAGSDVQNM NQTTSVGNSK 180 VLRLFGVNLE CQQQAAEHHE SEPSTPDGSS SSLSMSSQGP TYGQQQLYAP AAYNYADQHR 240 VRKPPKLSLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06250.2 | 1e-56 | B3 family protein |