PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001533.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 380aa MW: 43116.3 Da PI: 7.8356

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001533.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	8e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+ PCP001533.1 25 FLTKTYQLVDDPTTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCEIH 112 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PCP001533.1 113 RRKTA 117 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MALMIDNCES ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGDDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH 120 QVGLNHHHHH HHHSPLGMNG HHHHPSFFSF PSRGSISPSD SDEQPNWCES DSPPLLSPTG 180 GINTNNNNFM NINHNNTTVA GLAEDNERLR RSNNMLMSEL THMRKLYNDI IYFVQNHVKP 240 VAPSNSYPSS MLLCNPQPPK PNGLNGNLNQ LQGYYPAAPP PNAKQNPHHI MNSSSPMSNT 300 TSKSSVTILE DHHQQPPSSN NGCKNTKLFG VPLLHSKKRL HPEEYGSNNH HGNNMMEASK 360 ARLILEKDDL GLRLMPPSTC

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MALMIDNCES ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGDDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH  120
QVGLNHHHHH HHHSPLGMNG HHHHPSFFSF PSRGSISPSD SDEQPNWCES DSPPLLSPTG  180
GINTNNNNFM NINHNNTTVA GLAEDNERLR RSNNMLMSEL THMRKLYNDI IYFVQNHVKP  240
VAPSNSYPSS MLLCNPQPPK PNGLNGNLNQ LQGYYPAAPP PNAKQNPHHI MNSSSPMSNT  300
TSKSSVTILE DHHQQPPSSN NGCKNTKLFG VPLLHSKKRL HPEEYGSNNH HGNNMMEASK  360
ARLILEKDDL GLRLMPPSTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	2e-99	HSF family protein