PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001304.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 296aa    MW: 32532.5 Da    PI: 7.0117
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001304.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.85.9e-341872155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 k+rlrWt eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  PCP001304.1 18 KQRLRWTRELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72
                 79****************************************************8 PP
2Myb_DNA-binding63.25.2e-202071148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
      PCP001304.1 20 RLRWTRELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 71
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDLVSGGNSL NNPNLASKQR LRWTRELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI  60
YHVKSHLQKY RLAKYLPDSS SDGKKADKKE PGDVLSNLDG SSGMQITEAL KLQMEVQRQL  120
QLRIEAQGKY LKKIIEEQQR LSGVLSEAPG SGHLARLSSD NCPESDNKTD PATPAPTSEC  180
PLQDKAAKEC VPAKSISIDE SFSSHREPLT PDSGCHVGSP AESPKVERLT KKRWVNIGEP  240
FTDPEAVLTH QILESSLNSS YQQGHTAFLP REQFHPSSGI SFRNENQLEK DAGSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-116G2-like family protein