PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 601aa MW: 66830.4 Da PI: 7.9497 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.8 | 2.9e-14 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++ G g+W+ +ar g+ R++k+c++rw +yl PCP001205.1 26 KGLWSPEEDDKLMRYMINNGQGCWSDVARNAGLQRCGKSCRLRWINYL 73 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.5e-16 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia+ ++ gRt++++k++w++ PCP001205.1 79 RGAFSPQEEELIIHLHSLLGNR-WSQIAAQLP-GRTDNEIKNFWNS 122 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 601 aa Download sequence |
MRKPEPSSAA AGKNNKENNS NSKVRKGLWS PEEDDKLMRY MINNGQGCWS DVARNAGLQR 60 CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHSLLGNR WSQIAAQLPG RTDNEIKNFW 120 NSTIKKRLKN LASSNGSPNT SDSSPEAKDH RVVAAGRFII PSQEHGMVSI YRDSTPSFMQ 180 SAVLSHMFDP FPVLDIDQGG LTLSGAGGYY NANPCITQRE IGVGGGGDCY DFGENGGFGS 240 GDVDIGVEGE IFVPPLESVS IEDQNIKTET TYGDSNNNNN NYYNNINSIL TCNKTNKNIK 300 GESIIGVGNY FDDDQEELTR GDWDLEDLMK DVSSSSFPFL DYQSLEFGPT PKTKPDLKKL 360 HVAIGILAEY HECPLLLANE SGRKRASVPA YESSVNKKPM NYSVAHRSSA TPKKLVINLS 420 SLNEKKQAAE LEPMKSATPK KAKYIAENIV DSAAKEIAKS IHSSVTQLNC LPRRRKLFPR 480 VVVPEEFSEI LLLFNVELLK DLSGYAKQSP YGRALGLNKK DSPFMNQETT ENSRSTPDLM 540 FEKKIVSQGQ MHRWKSGTLS KGTEGKEDDI WRTLISIVRL EATYPPSTVL LLLSCRSLTP 600 W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 472 | 476 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 3e-57 | MYB family protein |