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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP000850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 454aa MW: 49405.9 Da PI: 8.3789 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.8 | 3e-09 | 139 | 175 | 1 | 43 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAa 43 s+y+GV++++++grW+++I+d + k+ s g f+ta Aa PCP000850.1 139 SQYRGVTFYRRTGRWESHIWD------CgKQLSGG-FDTAHSAA 175 78*******************......44888844.88766555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MEVEDSGTSN SSVVNADEAP TPGNAGDEDS TNNTTSSFMF DILRREKDGL FISGDGDQTQ 60 SLQFVTRPLF PVAGYGGGGK EGADCGLGLS SSSLSTARTH WLNLSFAESG SQTQAELRVV 120 QQKKQPPRKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQLSGGFDT AHSAASSLGF 180 NDFRAYDRAA IKFRGIDADI NFNVGDYEED MKLLGHLNKE EFVHVLRRQT TGASRGNTKY 240 RGVAAARLPE CGAKWEDRMG QVPRKKVFEK EAIKCRTGRE AVTNFDPNIY EGETVLNASV 300 EGSGHNLDLS LGISQPCSTG QKRIGKLGDF QFPKERLMVN GFSSAAMGQL PHVLTKCPAL 360 YPGFVQRHGE ITSDHNRLQP ISSPRYTNGA CQVYGNSNNV NPMQVFSIAA SSGFPSSTAT 420 TPPPPTSLPP NLQDSNTSAY NLGCLPFPAT SNIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 1e-64 | AP2 family protein |