PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000781.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 558aa MW: 61045.4 Da PI: 6.0202

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000781.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.8	1.3e-29	269	327	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt gCpv+k+v+r++ed +++++tYeg+Hnh+ PCP000781.1 269 NDGCSWRKYGQKISKGNPCPRAYYRCTVVaGCPVRKQVQRCQEDMSILITTYEGTHNHP 327 8************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGNGDKEKDL DVDLSLKIDA KEEKQEEGVG GEEEKEEKDA YRVNDGVEAA AAEEKEDEQG 60 PGVQNKRRKT RETGAGEVED DDVSVVETSV QENNMKTDQE LSVLQMEMSR MKEENKALRK 120 VVEQTMKDYY DLQMKFTVLH QSSQNKDPQT FLSLAGNDRN VVQGPRKITK MSDIRHRSPL 180 SPKRDDESQL GLSLRLTSSA TTASQLRGRE EEEDHDDKEE INNKEGLTRT TSLTSSSVQL 240 QNKLQRPELA GTTSHGGSQP NRKARVSIND GCSWRKYGQK ISKGNPCPRA YYRCTVVAGC 300 PVRKQVQRCQ EDMSILITTY EGTHNHPLPV GATAMGATAM ASTAAAAASF MLLDSSNLHL 360 ADGTPSTYTQ ASLPYHHMMN MNPSSHPSSN LRSVDPHDPS KGLVLDLTNN FYDTMGGSSS 420 SVPPGFSTNW LMSSTSSRSA NYPSSTSLTN CLLANGSRST RVALGDDQKG NWRSGEENMS 480 MAENVSAIAS DPKFRVAVAA AITSLINKDN HTTTSHPAPN AIAPRDHGDN NASSSTSNLW 540 AIDEHYLASN GKLIRKNT

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGNGDKEKDL DVDLSLKIDA KEEKQEEGVG GEEEKEEKDA YRVNDGVEAA AAEEKEDEQG  60
PGVQNKRRKT RETGAGEVED DDVSVVETSV QENNMKTDQE LSVLQMEMSR MKEENKALRK  120
VVEQTMKDYY DLQMKFTVLH QSSQNKDPQT FLSLAGNDRN VVQGPRKITK MSDIRHRSPL  180
SPKRDDESQL GLSLRLTSSA TTASQLRGRE EEEDHDDKEE INNKEGLTRT TSLTSSSVQL  240
QNKLQRPELA GTTSHGGSQP NRKARVSIND GCSWRKYGQK ISKGNPCPRA YYRCTVVAGC  300
PVRKQVQRCQ EDMSILITTY EGTHNHPLPV GATAMGATAM ASTAAAAASF MLLDSSNLHL  360
ADGTPSTYTQ ASLPYHHMMN MNPSSHPSSN LRSVDPHDPS KGLVLDLTNN FYDTMGGSSS  420
SVPPGFSTNW LMSSTSSRSA NYPSSTSLTN CLLANGSRST RVALGDDQKG NWRSGEENMS  480
MAENVSAIAS DPKFRVAVAA AITSLINKDN HTTTSHPAPN AIAPRDHGDN NASSSTSNLW  540
AIDEHYLASN GKLIRKNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	3e-41	WRKY family protein