PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000667.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 772aa MW: 86831.9 Da PI: 6.882

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000667.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.3	7.5e-33	200	254	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWt+eLHe+Fveav++LGGse+AtPk i++lmkv+gLt++hvkSHLQkYR+ PCP000667.1 200 KSRMRWTQELHEAFVEAVNHLGGSERATPKGIVNLMKVEGLTIYHVKSHLQKYRT 254 68****************************************************8 PP
2	Myb_DNA-binding	51.3	2.7e-16	202	253	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+ lGg t+k I + m +g+t +++ks++qky+ PCP000667.1 202 RMRWTQELHEAFVEAVNHLGGSeraTPKGIVNLMKvEGLTIYHVKSHLQKYR 253 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MQQQASSPGN LFPSASRPNE IHISSVPPCE QRSQNSPFIC KSPVDGKSLS LHRSSHSPHL 60 EVQPTALINY PEENKDISWC PDSLQDFLHF SESVPDQNGL VDSSAGVITS EEHAGKTNWS 120 DWDPLISFDD ALDPNWELPV DVDRMDPKPK QPQIQQHPPQ MQQYQLQIQQ HQPQIQQHQS 180 VQAVDFRPSP EPLSSAPPTK SRMRWTQELH EAFVEAVNHL GGSERATPKG IVNLMKVEGL 240 TIYHVKSHLQ KYRTARYKPE SSEVPCEKVS TPVEETNPLD VKGSMGITEA LRLQVELQKR 300 LHEQLENQRK LQLKIEEQGK YLEKMFEQQR KIEDNRVKSG SSTVDDHPTP LSDIACPSTG 360 GDKQETSTHQ HDKTVIRIPL DDGTQDASRE AQEPECPEDP DGVESAKAKV FYSSSSSSSA 420 ATSQQIKAQK TPRREKEEDV VSGGRPRDSP HLLRDGGGSA APRQSPRRPH LFHRHASFSE 480 SLYGLRRRAV KIKAMRNDDA RLNPGDEIQH SGLEKRQRLL SVVFLVVLPY FKSKLHSIYN 540 REREARLQAS LWGHVDERFD DADIIDRGED VVVSQGTSDM VVSVRTRLTK KIQKFIGACY 600 PLLHASSEGF SFAYQMLYLL DATGFYSLGL HALGIHVCRA TGQELALQGA LLSGTYTVLD 660 YAQTGLIAAV FFFKMMEWWY QSAEERMSAP TIYPPPPPPP PPQVAKEGIP LPPDRALCPL 720 CSQRRANPSV ITVSGFVFCY ACIFKYVSQY KRCPITLMPT TVDQIRRLFH DV

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MQQQASSPGN LFPSASRPNE IHISSVPPCE QRSQNSPFIC KSPVDGKSLS LHRSSHSPHL  60
EVQPTALINY PEENKDISWC PDSLQDFLHF SESVPDQNGL VDSSAGVITS EEHAGKTNWS  120
DWDPLISFDD ALDPNWELPV DVDRMDPKPK QPQIQQHPPQ MQQYQLQIQQ HQPQIQQHQS  180
VQAVDFRPSP EPLSSAPPTK SRMRWTQELH EAFVEAVNHL GGSERATPKG IVNLMKVEGL  240
TIYHVKSHLQ KYRTARYKPE SSEVPCEKVS TPVEETNPLD VKGSMGITEA LRLQVELQKR  300
LHEQLENQRK LQLKIEEQGK YLEKMFEQQR KIEDNRVKSG SSTVDDHPTP LSDIACPSTG  360
GDKQETSTHQ HDKTVIRIPL DDGTQDASRE AQEPECPEDP DGVESAKAKV FYSSSSSSSA  420
ATSQQIKAQK TPRREKEEDV VSGGRPRDSP HLLRDGGGSA APRQSPRRPH LFHRHASFSE  480
SLYGLRRRAV KIKAMRNDDA RLNPGDEIQH SGLEKRQRLL SVVFLVVLPY FKSKLHSIYN  540
REREARLQAS LWGHVDERFD DADIIDRGED VVVSQGTSDM VVSVRTRLTK KIQKFIGACY  600
PLLHASSEGF SFAYQMLYLL DATGFYSLGL HALGIHVCRA TGQELALQGA LLSGTYTVLD  660
YAQTGLIAAV FFFKMMEWWY QSAEERMSAP TIYPPPPPPP PPQVAKEGIP LPPDRALCPL  720
CSQRRANPSV ITVSGFVFCY ACIFKYVSQY KRCPITLMPT TVDQIRRLFH DV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.1	1e-70	G2-like family protein