PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000384.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 578aa MW: 64667 Da PI: 5.8396

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000384.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.8e-07	288	317	22	51
SSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNr 51 +yp+++++ LA+++gL++rq+ +WF N+ PCP000384.1 288 WPYPTEADKIALAESTGLDQRQINNWFINQ 317 58*************************995 PP
2	ELK	25.8	2.5e-09	241	262	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++L+r ++++Lg+Lk EFs PCP000384.1 241 DLKDRLMRRFGSHLGTLKLEFS 262 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MVDYGDTGFQ SAAEYEDRAP LMTPENLILP LDYRSLLVSS GAFREHNHHH HQREAMFGSN 60 DSVLYSAASE AASTTIVQRE EDVLGAIKAR IASHPTYPRL IHAYIECQKV GAPPEIAGFL 120 DEIRRKNDLY KKQGDYYCNS SSMFSSTCLG ADPELDEFME TYCDMLVKYR SDLSRPFDEA 180 TTFLSKIETQ LTNLCTSSSS ARVSSSVRIL SDEGGGMSSD EDFSGGEIDV QEAQQRGEDR 240 DLKDRLMRRF GSHLGTLKLE FSKKKKIGKL PKEARQTLLD WWSVHYKWPY PTEADKIALA 300 ESTGLDQRQI NNWFINQLTD MASLRLQLPF SAGPCLPNSR FRRSRVRSST ERQALFNRIA 360 PVYDNLNDLL SLGQHRIWKR MAVSWSGAKM GESVLDLCCG SGDLAFLLSE KVGSNGKVIG 420 LDFSKEQLSV ASSRQKLKSK ACYLNIEWVE GDATELPFSD GHFDAITMGY GLRNVVDKHK 480 AMEEIFRVLK AGSRVSILDF NKSTNPVVSS VQDLMIDNVV VPVASGFGLE EDYKYLKSSI 540 REFLTGDELE KLALDGGFSN AKYYEIGGSL MGNLVATR

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MVDYGDTGFQ SAAEYEDRAP LMTPENLILP LDYRSLLVSS GAFREHNHHH HQREAMFGSN  60
DSVLYSAASE AASTTIVQRE EDVLGAIKAR IASHPTYPRL IHAYIECQKV GAPPEIAGFL  120
DEIRRKNDLY KKQGDYYCNS SSMFSSTCLG ADPELDEFME TYCDMLVKYR SDLSRPFDEA  180
TTFLSKIETQ LTNLCTSSSS ARVSSSVRIL SDEGGGMSSD EDFSGGEIDV QEAQQRGEDR  240
DLKDRLMRRF GSHLGTLKLE FSKKKKIGKL PKEARQTLLD WWSVHYKWPY PTEADKIALA  300
ESTGLDQRQI NNWFINQLTD MASLRLQLPF SAGPCLPNSR FRRSRVRSST ERQALFNRIA  360
PVYDNLNDLL SLGQHRIWKR MAVSWSGAKM GESVLDLCCG SGDLAFLLSE KVGSNGKVIG  420
LDFSKEQLSV ASSRQKLKSK ACYLNIEWVE GDATELPFSD GHFDAITMGY GLRNVVDKHK  480
AMEEIFRVLK AGSRVSILDF NKSTNPVVSS VQDLMIDNVV VPVASGFGLE EDYKYLKSSI  540
REFLTGDELE KLALDGGFSN AKYYEIGGSL MGNLVATR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-114	TALE family protein