PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000360.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 892aa MW: 100471 Da PI: 8.7112

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000360.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66	9.9e-21	237	330	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+e+Ak++GFs+r+++++ + + it+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel PCP000360.1 237 EYYSEFAKRCGFSIRRHRTEGKvGVGKGITRRYFVCHRAGNTPIKNSSESKPQRNRKSSRCGCQAYMRISKTTelgALEWRVTGFANHHNHELL 330 69************998877567778***********99999999****************99887889***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MNRRLTAKSK AKLRMGSGFW QVMNSAQETK LLEKKTCEPE KCVNKVCRVC LKVGHWTCAS 60 IISAVLFTCI VIYVKCGVST SLSVEASVED LRPTHAAAAA AATATAAPCH LCVDSAAVFV 120 ANSKSRNPIS QGNRLPDSKP ISSISPNFVF SIENLSWVFI YMTNMSEVGV VSAAAGLRND 180 NIMLVVYDDA SDQRSLSLDD TSSTEESPDE TRLSLETTND LTPYIGQRFS THDAAYEYYS 240 EFAKRCGFSI RRHRTEGKVG VGKGITRRYF VCHRAGNTPI KNSSESKPQR NRKSSRCGCQ 300 AYMRISKTTE LGALEWRVTG FANHHNHELL EPNQVRFLPA YRTISESDKS RILMFAKTGI 360 SVQQMMRLME LEKCVEPGCL PFTEKDVRNL LQSFRKLDPE EESIDLLRMC RSIKEKDPNF 420 KFEYTLDSNH RLENIAWSYA SSVQAYESFG DAVVFDTTHR LTAFDMPLGI WVGINNYGMP 480 CFFGCVLLRE ESLRSFSWAL KAFLSFMYGK APQTILTDQN VFLKEAISME MPTAKHALCI 540 WMIVAKFPSW FNAVLGERYN EWKRMTAIGQ SKFINAFIQR FLSAQTRLAH FVEQVAVAVD 600 FKDQAGEQQT MQQNLQNICL KTGAPMESHA ASILTPHAFS KLQEQLVLAA HYASFQMEDG 660 FLVRHHTKAD GGRKVYWVPQ EGIISCSCHH FEFSGILCRH ALRVLSTGNC FQIPDRYIPV 720 RWRRISMPSA KLLQSAPSEH AEKIQLLQNI VSTLVTESAK SRERLDIATE QVSILLSHSI 780 VQVLMDSNAC QGLLKNVSRT GLEAAICTRG LEADHRGVSE VSCRPSYCKI LWSMYRPQNT 840 ARPLFPTGIL ELLQQKAVKR KANFEESKKL KERLQTLRKE TAEITTESSV QA

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MNRRLTAKSK AKLRMGSGFW QVMNSAQETK LLEKKTCEPE KCVNKVCRVC LKVGHWTCAS  60
IISAVLFTCI VIYVKCGVST SLSVEASVED LRPTHAAAAA AATATAAPCH LCVDSAAVFV  120
ANSKSRNPIS QGNRLPDSKP ISSISPNFVF SIENLSWVFI YMTNMSEVGV VSAAAGLRND  180
NIMLVVYDDA SDQRSLSLDD TSSTEESPDE TRLSLETTND LTPYIGQRFS THDAAYEYYS  240
EFAKRCGFSI RRHRTEGKVG VGKGITRRYF VCHRAGNTPI KNSSESKPQR NRKSSRCGCQ  300
AYMRISKTTE LGALEWRVTG FANHHNHELL EPNQVRFLPA YRTISESDKS RILMFAKTGI  360
SVQQMMRLME LEKCVEPGCL PFTEKDVRNL LQSFRKLDPE EESIDLLRMC RSIKEKDPNF  420
KFEYTLDSNH RLENIAWSYA SSVQAYESFG DAVVFDTTHR LTAFDMPLGI WVGINNYGMP  480
CFFGCVLLRE ESLRSFSWAL KAFLSFMYGK APQTILTDQN VFLKEAISME MPTAKHALCI  540
WMIVAKFPSW FNAVLGERYN EWKRMTAIGQ SKFINAFIQR FLSAQTRLAH FVEQVAVAVD  600
FKDQAGEQQT MQQNLQNICL KTGAPMESHA ASILTPHAFS KLQEQLVLAA HYASFQMEDG  660
FLVRHHTKAD GGRKVYWVPQ EGIISCSCHH FEFSGILCRH ALRVLSTGNC FQIPDRYIPV  720
RWRRISMPSA KLLQSAPSEH AEKIQLLQNI VSTLVTESAK SRERLDIATE QVSILLSHSI  780
VQVLMDSNAC QGLLKNVSRT GLEAAICTRG LEADHRGVSE VSCRPSYCKI LWSMYRPQNT  840
ARPLFPTGIL ELLQQKAVKR KANFEESKKL KERLQTLRKE TAEITTESSV QA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	859	871	KRKANFEESKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein