PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000346.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 339aa MW: 37782.4 Da PI: 10.0793

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000346.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.4	9.1e-30	250	303	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ R+ PCP000346.1 250 PRMRWTSTLHGRFVHAVEHLGGHERATPKSVLELMNVKDLTLAHVKSHLQGNRM 303 9*************************************************8875 PP
2	Myb_DNA-binding	42.3	1.8e-13	251	299	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT ++ ++v+av+ lGg+ t+k++ + m+ k +tl ++ks++q PCP000346.1 251 RMRWTSTLHGRFVHAVEHLGGHeraTPKSVLELMNvKDLTLAHVKSHLQ 299 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MPLEGIFIEP STTGTTSSQI PDLSLHISPP NTTSSNSSSI FNNKTTNEPQ NPTTQAHTGL 60 SLGRCFTGGA HEQEPPQNPY QQQSFHLHSS NSHLSHLNHG VSLLDVSSSE RLRPIKGIPV 120 YHQNRSFPFL PMDNIITRDH HKDSKMCFYP GPLPPSFNHP FPSAATHNTQ STPYFGGGGA 180 TGLEPMSRFT GFSPVDAFKS NNQLHHHHHL HHHNQYGIGG VGPISEGSHH GIMRSRFLPK 240 LPTKRSMRAP RMRWTSTLHG RFVHAVEHLG GHERATPKSV LELMNVKDLT LAHVKSHLQG 300 NRMDLARTTY SLRLAAQRII MDYTILNSFR SNEDRLISL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-42	G2-like family protein