PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000199.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 1278aa MW: 142428 Da PI: 6.9017

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000199.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.3	1.5e-28	789	845	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES-.-SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege.Hnhe 59 gynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g Hnh PCP000199.1 789 HGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSY-DGQITEIIYKGApHNHA 845 69************************************.********9669997 PP
2	WRKY	103.9	8.6e-33	1015	1073	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v++tYeg+Hnhe PCP000199.1 1015 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKFVITTYEGKHNHE 1073 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1278 aa Download sequence
MIISLIKQCN TLSSLKAVHA AVLRTHDLHL NLFLCTNLIA HYASLGSPSH AYTLFSAVSS 60 ASDVFLWNVM IRGFVDNGLY NKAIALYSKM WDVGVRPDHF TFPFVIKACG FARDWRLGKK 120 VHGDVIECGY ALDVFVGNAL IGLYGKFGQV ETARKVFYKI PQRNVVSWSS MIGVYAQNGC 180 FEDGWEFFLM MLNEKITPNR ASVLNAMACV FQENDAGEVC GVVTGNGLDL DRSVQNAAMQ 240 MYARCGRMDI AQVFFDRISD KDLVSWSSMI EAYAQADLPL EAVELFKELR EQGVLPDLVA 300 LLSVVRACSS LASFQQARWI HGLVIRSFFS NYIAIETSIV DLYVKCGSLM YARRVFDEMQ 360 ERNIISWSTM ISGYGMHGHG REAVNLFHQM KALIIPDHIA FLSVLSACSH GGLIAEGWDC 420 FNSMSRDFHV TPRPEHYACM VDLLGRAGRL YEAFEFIERM PARPDAGVWG SLLGACRIHS 480 NTELAKIAAG HLFELDAGNP GRYVLMSNIY ASSGKQKDAD EIRDLMKQRG LRKVAGHTSI 540 EIKNKVYTFV AGDHSHAQSD LIYMELEKLI NRIRQEGYKP DLNFVLHDVE EEMKEKMLYA 600 HSEKLAIVFG LLNLGPESVI RIKKNLRVCG DCHTASKFIS KALPSPTTGT FQLRPPNDNS 660 SLLKSGTRED DGYRPAYSNF GNQGSTVDYQ ALVLEQQPME FQFPMEFSKE ANAMNYAVDP 720 STDVRNISSG VIMNANGANL QMSHSSAVSD QNSLPKEAVD GEDMGTHQFS EGEHKGSHSA 780 AGMVRTSEHG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCQV KKKVERSYDG QITEIIYKGA 840 PHNHAKPQPN RKAGASVGPS FSYDDMLEMG EGSRAAVKVE GGPVWTNIQS CKDRKVGYDG 900 RPDGLERTSS ASVVTELSDP FSTTQGKSMN IFESAETPDL SSTLASHDDD DQATQGSISL 960 GDDADDEESD SKRRQVNFCL SQRKKESCMI ETNFASRDVH KPRVVVQIES EIDILDDGYR 1020 WRKYGQKVVK GNPNPRSYYK CTSAGCSVRK HVERASHDLK FVITTYEGKH NHEVPAARNS 1080 NHMNSSSGNG LPSTANAQPV LVLPRNTNIP KPETQVQDLA PHFDRKAEFH DKYMRPSFLG 1140 NFSNDMKFGA SSPYQMKYPP LQNTMLYASF GMHANHNVAH QAGSVVPDFP ISLPMNLPPP 1200 GNLPLASYDF NNGKSVCPEQ PYFSGQQLQE IDVRFLQPKQ EQKDDNLYDA CFPTMDQSSA 1260 ALSSSSLFYH RVMGGYPS

Sequence ? help Back to Top

Protein Sequence Length: 1278 aa Download sequence

MIISLIKQCN TLSSLKAVHA AVLRTHDLHL NLFLCTNLIA HYASLGSPSH AYTLFSAVSS  60
ASDVFLWNVM IRGFVDNGLY NKAIALYSKM WDVGVRPDHF TFPFVIKACG FARDWRLGKK  120
VHGDVIECGY ALDVFVGNAL IGLYGKFGQV ETARKVFYKI PQRNVVSWSS MIGVYAQNGC  180
FEDGWEFFLM MLNEKITPNR ASVLNAMACV FQENDAGEVC GVVTGNGLDL DRSVQNAAMQ  240
MYARCGRMDI AQVFFDRISD KDLVSWSSMI EAYAQADLPL EAVELFKELR EQGVLPDLVA  300
LLSVVRACSS LASFQQARWI HGLVIRSFFS NYIAIETSIV DLYVKCGSLM YARRVFDEMQ  360
ERNIISWSTM ISGYGMHGHG REAVNLFHQM KALIIPDHIA FLSVLSACSH GGLIAEGWDC  420
FNSMSRDFHV TPRPEHYACM VDLLGRAGRL YEAFEFIERM PARPDAGVWG SLLGACRIHS  480
NTELAKIAAG HLFELDAGNP GRYVLMSNIY ASSGKQKDAD EIRDLMKQRG LRKVAGHTSI  540
EIKNKVYTFV AGDHSHAQSD LIYMELEKLI NRIRQEGYKP DLNFVLHDVE EEMKEKMLYA  600
HSEKLAIVFG LLNLGPESVI RIKKNLRVCG DCHTASKFIS KALPSPTTGT FQLRPPNDNS  660
SLLKSGTRED DGYRPAYSNF GNQGSTVDYQ ALVLEQQPME FQFPMEFSKE ANAMNYAVDP  720
STDVRNISSG VIMNANGANL QMSHSSAVSD QNSLPKEAVD GEDMGTHQFS EGEHKGSHSA  780
AGMVRTSEHG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCQV KKKVERSYDG QITEIIYKGA  840
PHNHAKPQPN RKAGASVGPS FSYDDMLEMG EGSRAAVKVE GGPVWTNIQS CKDRKVGYDG  900
RPDGLERTSS ASVVTELSDP FSTTQGKSMN IFESAETPDL SSTLASHDDD DQATQGSISL  960
GDDADDEESD SKRRQVNFCL SQRKKESCMI ETNFASRDVH KPRVVVQIES EIDILDDGYR  1020
WRKYGQKVVK GNPNPRSYYK CTSAGCSVRK HVERASHDLK FVITTYEGKH NHEVPAARNS  1080
NHMNSSSGNG LPSTANAQPV LVLPRNTNIP KPETQVQDLA PHFDRKAEFH DKYMRPSFLG  1140
NFSNDMKFGA SSPYQMKYPP LQNTMLYASF GMHANHNVAH QAGSVVPDFP ISLPMNLPPP  1200
GNLPLASYDF NNGKSVCPEQ PYFSGQQLQE IDVRFLQPKQ EQKDDNLYDA CFPTMDQSSA  1260
ALSSSSLFYH RVMGGYPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-81	WRKY family protein