PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000182.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 406aa    MW: 45658.7 Da    PI: 8.3973
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000182.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-1570129155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a++k++g
  PCP000182.1  70 SRFRGVSRHRWTGRFEAHLWDkLSWNItqkKKgKQVYLGAYDEEESAARAYDLAALKYWG 129
                  789******************888855655447*************************98 PP

2AP256.37.7e-18172223155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV +++ +grW+A+I   +   g +k+ +lg++gt eeAa+a++ a+ +++g
  PCP000182.1 172 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGTQEEAARAYDIAAIEYRG 223
                  89****99**********99966...3.6*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MELMMVKNEE NRGRRRLSAA DREVQAARCV KRRRRDPPAV TVSSDNNQIE LQLPQKPADQ  60
TPATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNITQKK KGKQVYLGAY DEEESAARAY  120
DLAALKYWGA STFTNFAISD YEKEIEIMQS VTKEEYLASL RRKSSGFSRG VSKYRGVARH  180
HHNGRWEARI GRVFGNKYLY LGTYGTQEEA ARAYDIAAIE YRGINAVTNF DLSSYIRWLK  240
PKAGDTIATQ ELEAVTEPQK MPFMANGYIP ADETSFPHTN PFPSDCLNSP RNQEVTRSST  300
NLNAGSKSSS PTALGLLLQS SIFRELVQKN SNLSEDDSTD DEEPKNQPQA GSDEEYGGIF  360
HAGTGENPFV CSSSTDGDNP WNNIASTILL NQPTKANASD SLFFFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11435RRRLSAADREVQAARCVKRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.38e-94AP2 family protein