PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004305.1_g170.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 465aa    MW: 50965.8 Da    PI: 6.8633
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004305.1_g170.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.81.2e-07322355137
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfg 37 
                                s y+GV+++++ grW A+I  +     +k  +lg+f 
  Pav_sc0004305.1_g170.1.mk 322 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFT 355
                                78****************988532...5*******96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MSNWLGFSLT PHLRIHEGFG GGEDQQDHGG GGGFTSQMTI MPLRSDGSLC VPADPFRRPN  60
GSEDWRYENH MGATSVTDPN DERGPKLEDF LGSCYSSSPT PSETKVYNCQ STQQDQNPET  120
ISQINVNEAP NFNTTTNNRE DNNNNNLIQP YSHYCTLNPP SLIPSNGMYK SWLGQTVPFS  180
DEKSSPCGDH HQANGNSFHQ SSLSLTMSPS LQQNGNNMGA ISQLQIVESK KRPVGKSAAR  240
EPVPRKSIDT FGQRTSQFRG IGGLGDMRPI CGIIVAEKKG KQGKEGKLST YEKELEEMKN  300
MTRQEFVANL RRKSSGFSRG ASVYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFTSGEPC  360
DDMAEMVWNN NNAEDHSHSH NENSNTTTNN AALGASSSRN SSSPQSPKCS FGHTSEFGLG  420
GDYSHAYFSM QGAKYEDGNG GGNDHSRLGN LGLVPQVPMF ALWND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-50AP2 family protein