PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002061.1_g090.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 185aa    MW: 20816.4 Da    PI: 8.6772
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002061.1_g090.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.63.2e-0899131136
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 
                                s y+GV++++++grW A+I  +     +k  +lg+f
  Pav_sc0002061.1_g090.1.mk  99 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTF 131
                                57****************988532...5*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSADGDFLFT FCIKCGICLS GCHSTSDPVS TVYLGGYDKE DKAARAYDLA ALKYWGPTAT  60
TNFPVSTYSK ELEDMKHVTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV  120
AGNKDLYLGT FAATAYYHHN LFQQFQPNYY GPCDSSGLTP NIATQMSMMP QQPAEFYIWP  180
HHQSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.16e-64AP2 family protein