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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001557.1_g160.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 322aa MW: 35473.7 Da PI: 6.5237 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 96 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ +e+A a+++a+ k++g Pav_sc0001557.1_g160.1.mk 96 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYEKPEDAGLAYDRAAFKMRG 146 69*******.***********9987..*************************98 PP | |||||||
2 | AP2 | 25.4 | 3.5e-08 | 198 | 226 | 28 | 55 |
AP2 28 r.krfslgkfgtaeeAakaaiaarkkleg 55 + +r++lg++ tae+A a+++a+ k++g Pav_sc0001557.1_g160.1.mk 198 NgARVWLGTYETAEDAGLAYDRAAFKMRG 226 339************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MYGETTLELE SDLAFLESIR HHLLDDLEPQ AVSFTGNNVP VIFPLFAMEN WWESSLKAEH 60 VDNDVQGLLG ALNDVNYVGC VVSDDKIELK EQKEWHYRGV RRRPWGKFAA EIRDPAKNGA 120 RVWLGTYEKP EDAGLAYDRA AFKMRGCKAK LNFPHLIGSS NVEPVRVTPK RRRSLDLSSS 180 SSSSDNGSPK PKLSKGGNGA RVWLGTYETA EDAGLAYDRA AFKMRGSKAK LNFPHLIGSH 240 DSEPGRVAPK RGSPEPSFSS ATSSDDGGSP TLKRRKSGVD SATKAKSEEA AEQFHVFQVD 300 SLTLDGQLLV DELYTYDGLL AI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-41 | ERF family protein |