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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000661.1_g360.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 268aa MW: 30535.7 Da PI: 9.0488 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.2 | 1.2e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss Pav_sc0000661.1_g360.1.mk 9 KRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 96.5 | 4.1e-32 | 75 | 174 | 1 | 100 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 y++++ + +e + + ++ e+ kL ++ie Lqr++Rh+ GedL++Lsl+eLq+Le qLe++lk+iR++Kn+l++e+i+el kk+ Pav_sc0000661.1_g360.1.mk 75 YAEQQLTTDAEPQGSCWSLEYPKLAARIEVLQRKLRHFTGEDLDPLSLRELQNLELQLETALKRIRTRKNHLMHESISELHKKQ 158 566777788899999********************************************************************* PP K-box 85 kelqeenkaLrkklee 100 k+lqe+n++L kkl+e Pav_sc0000661.1_g360.1.mk 159 KALQEQNNSLAKKLKE 174 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRGKVQLKR IENKISRQVT FSKRRTGLLK KAHEISVLCD ADVALIVFST KGKLFEYSSD 60 SSMERILERY DQYSYAEQQL TTDAEPQGSC WSLEYPKLAA RIEVLQRKLR HFTGEDLDPL 120 SLRELQNLEL QLETALKRIR TRKNHLMHES ISELHKKQKA LQEQNNSLAK KLKENENMLE 180 VEHDGPGQQV EQHQSNQAAH NSSTLLLMPP LPPQPSSTPA LLASLTIGGG IQARGGMEAG 240 DDNDRRTQTR PPTTNTLMPM WMFRHLNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 2e-74 | MIKC_MADS family protein |