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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000581.1_g040.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 531aa MW: 58750.4 Da PI: 7.0532 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.9e-17 | 176 | 225 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pav_sc0000581.1_g040.1.mk 176 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 225 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence |
MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRVGSV SNSSSSAVVV EDDGSDEEED 60 NDGPAKLAKT RGGGRGKIFG FSMTHEESMD SDPPVTVTRQ FFPVELDSTS EIMGPTRGGV 120 PPPAPPPSSS SFPRAHWVGV NFGQSDSGSP GKPPAAVEAA HQPMKKSRRG PRSRSSQYRG 180 VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFSIEDYEED 240 LKQMTNLTKE EFVHVLRRQS TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKAYDKAAIK 300 CNGKEAVTNF DPSIYENELN PFSESSGVNA AEHNLDLSLG NSNSKKNNQA FGSSDHGQNA 360 AMEVQHSASM QLEADWRNQG FRQKLNLQRD RSREESDAHR RDGYLETEAM QLLLRTNLHS 420 PAPTEMHTYG QFSRRPNVGD TQMPHTFPPH FNSPNNYHLV QFPSSSEGGR IGSDLSLSMS 480 DHQHQQQWQS GTPTSDIFAT AAASSGFPPQ IRPSAQNCWL QKSGFHSLTR R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 2e-95 | AP2 family protein |