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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000359.1_g460.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 483aa MW: 52781.7 Da PI: 9.2812 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.8 | 9.7e-12 | 174 | 230 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g Pav_sc0000359.1_g460.1.mk 174 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 230 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 22.2 | 3.6e-07 | 273 | 305 | 1 | 36 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 s y+GV+++++ grW A+I + +k +lg+f Pav_sc0000359.1_g460.1.mk 273 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 305 57****************988532...5*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFTSSPSHT SAHQQQDHSN PGGATPSSPT 60 DLSIFSSGVG GPKLEDFLGG STATPPSLAH FSGTTAAADQ PHNHQQTAPL ALSENEIYDS 120 ELKTIAASFL RGFSTPATAA ATSVQTIKPQ NLVPLASSEL TPKKTPDTFG QRTSIYRGVT 180 RHRWTGRYEA HLWDNSCRRE GQSRKGRQGG YDKEEKAARA YDLAALKYWG PTTTTNFPVS 240 SYEKELNEMK NMTRQEFVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL 300 YLGTFRNRSA DDRDLSSASS VTFASQQTSS STLSFAIPIK QDPSTDYWSN IFGYHHNAKN 360 PSTVSVAPSS LFQSCTTNVP YGNNSSQIPF SMDFSVSATS STSPSETNNG YFVNYNAHGQ 420 QKQQQDQSTS GTNSIPFATP IALNSNNGFE TSSGYGSWIG PSLHTFQTHA KTNLFQTPIF 480 GME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-114 | AP2 family protein |