PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000148.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 397aa MW: 44592.2 Da PI: 6.6494

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000148.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.8	2.4e-12	66	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++++e Aa ++ a++k++g Pav_sc0000148.1_g270.1.mk 66 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQNKKGRQGAYDSEEAAAHTYDLAALKYWG 122 57*****************777799988888********************98 PP
2	AP2	53	8.6e-17	165	217	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g+ Pav_sc0000148.1_g270.1.mk 165 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDMAAIEYRGA 217 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MKRSPSSCCS SSSSSSSSYA GPETPHLNQA ENQKPKAKRI RKNQNNPTEK CQNGTNPNTG 60 GGRRSSIYRG VTRHRWTGRF EAHLWDKSSW NNIQNKKGRQ GAYDSEEAAA HTYDLAALKY 120 WGPGTTLNFP METYTKELEE MQKASREEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE 180 ARIGRVFGNK YLYLGTYNTQ EEAAAAYDMA AIEYRGANAV TNFDISNYID KFKKESEEPP 240 PKCFDAGLPE DKKVEHKVHQ LQPQQQQQQE QQQEQFVPTT QLQYPHLLHC IESNTMDQVM 300 DAADEHRFTW NFLDTGLMAQ LPVADIPLDN KPLELPDLFE DLRFEENFDL IFGAAGDADL 360 GGLMESAGCG VGVGVPRNLE DNGSSSSPSS TTTSVSF

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MKRSPSSCCS SSSSSSSSYA GPETPHLNQA ENQKPKAKRI RKNQNNPTEK CQNGTNPNTG  60
GGRRSSIYRG VTRHRWTGRF EAHLWDKSSW NNIQNKKGRQ GAYDSEEAAA HTYDLAALKY  120
WGPGTTLNFP METYTKELEE MQKASREEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE  180
ARIGRVFGNK YLYLGTYNTQ EEAAAAYDMA AIEYRGANAV TNFDISNYID KFKKESEEPP  240
PKCFDAGLPE DKKVEHKVHQ LQPQQQQQQE QQQEQFVPTT QLQYPHLLHC IESNTMDQVM  300
DAADEHRFTW NFLDTGLMAQ LPVADIPLDN KPLELPDLFE DLRFEENFDL IFGAAGDADL  360
GGLMESAGCG VGVGVPRNLE DNGSSSSPSS TTTSVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-93	AP2 family protein