PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G05670.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 324aa    MW: 34280.6 Da    PI: 9.1267
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G05670.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.26e-3170124358
      ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      ++rY+eClkNhAa++Gg a+DGCgEfmp  geeg+ +al+C+ACgCHRnFHR+e +
  ONIVA12G05670.2  70 AARYRECLKNHAAAIGGSATDGCGEFMPG-GEEGSLDALRCSACGCHRNFHRKELD 124
                      689*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDLSGAQGEL PLPMHAAASP YLGLHHDHHH HHGGGGGGGM NGRHMSPPTP PAAAEESKAV  60
VVVSSSSSAA ARYRECLKNH AAAIGGSATD GCGEFMPGGE EGSLDALRCS ACGCHRNFHR  120
KELDAAATPL HHHHQLLGVG AHPRGHGHHH HHLLVAALPP PTRMVMPLSA MHTSESDDAA  180
ARPGGGGAVA ARKRFRTKFT AEQKARMLGF AEEVGWRLQK LEDAVVQRFC QEVGVKRRVL  240
KVWMHNNKHT LARRHLHPSS SAAAAGDDDD GAPPHPDPGG ASSPPPPPHH LRLQGEEGGG  300
RNPLRNKMKL HLASASASIR LQVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.14e-56ZF-HD family protein