PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA12G05670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 294aa MW: 31107 Da PI: 8.4525 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.5 | 5.2e-31 | 70 | 125 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++rY+eClkNhAa++Gg a+DGCgEfmp geeg+ +al+C+ACgCHRnFHR+e + ONIVA12G05670.1 70 AARYRECLKNHAAAIGGSATDGCGEFMPG-GEEGSLDALRCSACGCHRNFHRKELDA 125 689*************************9.999********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MDLSGAQGEL PLPMHAAASP YLGLHHDHHH HHGGGGGGGM NGRHMSPPTP PAAAEESKAV 60 VVVSSSSSAA ARYRECLKNH AAAIGGSATD GCGEFMPGGE EGSLDALRCS ACGCHRNFHR 120 KELDAAATPL HHHHQLLGVG AHPRGHGHHH HHLLVAALPP PTRMVMPLSA MHTSESDDAA 180 ARPGGGGAVA ARKRFRTKFT AEQKARMLGF AEEVGWRLQK LEDAVVQRFC QEVGVKRRVL 240 KVWMHNNKHT LARRHLHPSS SAAAAGDDDD GAPPHPDPGG ASSPPPPPHH LRLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 5e-56 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA12G05670.1 |