PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G13750.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family SBP
Protein Properties Length: 348aa    MW: 36634.2 Da    PI: 10.6532
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G13750.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP42.91.3e-131361654978
                      EEETTT--SS--S-STTTT-------S--- CS
              SBP  49 fhelsefDeekrsCrrrLakhnerrrkkqa 78 
                      fh+l efD++k+sCr+rL++hn+rrrk+q+
  ONIVA11G13750.2 136 FHNLAEFDDGKKSCRKRLDGHNRRRRKPQH 165
                      9**************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEWAAAATKA ASWGMAVAAA AAAADDAGPT MLSFAGPSSS SSSPDAAAAA AAAAALHDFS  60
VRARPAAAAP ATRRALGRRV PVGPQPVPRL PPPPQGLRGP RQDAGGRRRR PGAALLPAMQ  120
PYRFSVHVLN MLRAIFHNLA EFDDGKKSCR KRLDGHNRRR RKPQHDALNP RSFLPYHQAN  180
QFSVYPQTFP IADQNADALM RPLDRHPPFS ISFSGTFREP KQFPFMQDGG SGLGAARHDL  240
LRPFSSPEDG ANITTTRSAC NGVPHGLDPE CALSLLSSSL HPSPAAGISS ATAPPQFAPS  300
SFSRIAASSQ AVTTAFASDG GSVAGDHVLV PAVTYEDPSQ AMPFSWQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146163KKSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.17e-12SBP family protein