PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G13750.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

SBP

Protein Properties

Length: 325aa MW: 34099.1 Da PI: 8.4015

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G13750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	98.1	7.9e-31	87	142	23	78
--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 23 vCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 vCe+h+k+pvv+v+g+eqrfCqqCsrfh+l efD++k+sCr+rL++hn+rrrk+q+ ONIVA11G13750.1 87 VCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKPQH 142 9****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEWAAAATKA ASWGMAVAAA AAAADDAGPT MLSFAGPSSS SSSPDAAAAA AAAAALHDFS 60 VRARPAAAAP ATRRALGRRV PVGPQPVCEA HAKTPVVVVA GQEQRFCQQC SRFHNLAEFD 120 DGKKSCRKRL DGHNRRRRKP QHDALNPRSF LPYHQANQFS VYPQTFPIAD QNADALMRPL 180 DRHPPFSISF SGTFREPKQF PFMQDGGSGL GAARHDLLRP FSSPEDGANI TTTRSACNGV 240 PHGLDPECAL SLLSSSLHPS PAAGISSATA PPQFAPSSFS RIAASSQAVT TAFASDGGSV 300 AGDHVLVPAV TYEDPSQAMP FSWQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	140	KKSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	7e-27	SBP family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G13750.1