PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G08220.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 402aa    MW: 42365.9 Da    PI: 7.7928
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G08220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.62.7e-32141195358
      ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      +v+Y+eClkNhAa++Gg+a+DGCgEfmps geeg+ +alkC+ACgCHRnFHR+e +
  ONIVA11G08220.1 141 AVKYRECLKNHAAAIGGNATDGCGEFMPS-GEEGSLEALKCSACGCHRNFHRKEAD 195
                      689*************************9.999********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MVSILQLQTR TEASPASSAS AAATRIFAVR RQQQEQEGEE EEEFEFQERM DLSGAQGELP  60
IPMHASTAAS PFAGMGAHGG AGGGHVVELH RHEHVGNNGQ AMAMASPPPT NVAVAAEQEG  120
SPVAGKKRGG MAVVGGGGGV AVKYRECLKN HAAAIGGNAT DGCGEFMPSG EEGSLEALKC  180
SACGCHRNFH RKEADDLDAD SCAAALRAAA GRHHHLLGPA LPHHHHKNGG GLLVAGGDPY  240
GAAYAAARAL PPPPPPPPHG HHHHHQIIMP LNMIHTSESD EMDVSGGGGG GGRGGGSSSS  300
SKKRFRTKFT AEQKARMLEF AERVGWRLQK LDDAMVHHFC QEIGVKRRVL KVWMHNNKHN  360
LAKKPLPSSP PPPPQIPPMS MPPSPPPMPM PMPPSPPQLK LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.15e-27ZF-HD family protein