PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA11G03830.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | Trihelix | ||||||||
Protein Properties | Length: 445aa MW: 50373.4 Da PI: 6.5087 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 85.8 | 5.3e-27 | 114 | 210 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++e+ +++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++++++d ONIVA11G03830.2 114 KWTDSMVKLLITAVSYTGEDPGADLgggrrnysmmQKKGKWKAISKVMGERGCHVSPQQCEDKFNDLNKRYKRLTDILGRGtACNVVENHSLLD 207 7*********************8744455667777**********************************************55*********** PP trihelix 84 qle 86 +++ ONIVA11G03830.2 208 HMD 210 *97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MEGSNPPGNM TQGPSYGSLD LHGISKQMHP PNSGNQGFNQ PQIPGNFTIP MDRVTEPDNI 60 SDGVQLGQHG KIAHHHHHHR HHSKNHGSDE EEHDMNEDAA DGKDKKGSPW HRMKWTDSMV 120 KLLITAVSYT GEDPGADLGG GRRNYSMMQK KGKWKAISKV MGERGCHVSP QQCEDKFNDL 180 NKRYKRLTDI LGRGTACNVV ENHSLLDHMD ISEKMKEDAR KILNSKHLFY EEMCSYHNNN 240 RISLPEDPAL QQSLQLALRC KEDNDFMRHA SGDAELDDDQ SEDSDYEGNE EEHRAVDTNI 300 RGPSMHKRMW HVVDYGDVGF VTSCSNDGSG RSDPYDVLDI NKPFPDGCDL ALVQKDLALK 360 AAEIQKHRLQ IETKAVQLAK QRLKWEMFRK NKDLELEKLA LENEQMMLQN KRLQINSIQD 420 RGVLFLTMNA EVKSKCGGLA SQMAM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 5e-91 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA11G03830.2 |