PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G17310.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | Trihelix | ||||||||
Protein Properties | Length: 875aa MW: 91535.5 Da PI: 5.8504 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 99.1 | 3.6e-31 | 186 | 270 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++rs+k+Ckek+en++k+yk++ke++ +r ++ +t+++f+qlea ONIVA10G17310.2 186 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRSAKKCKEKFENVHKYYKRTKESRAGR--NDGKTYRFFTQLEA 270 8********************************************************************97..56668*******85 PP | |||||||
2 | trihelix | 111 | 7e-35 | 563 | 648 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+++++r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a ONIVA10G17310.2 563 RWPKAEVHALIQLRSNLDNRYQEAGPKGPLWEEISAGMRRLGYSRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 648 8*********************************************************************8.99***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 875 aa Download sequence |
MAIYYLEREG LTHNMPMHGH FYTPLPLNHW HADTTNAADM TRGPMRMWDP HVSGVLMRVE 60 MVSSPDVLII PSPPFPSGNT RGGGGGGGGS SMQQQQPGGG GGGVQQFGAV APEMSPFSPA 120 GGGGGGRISM AEAASPISSR PPPAQQQFDE LGVGGGGGGG GGFDAEALAA AAVGEEGASG 180 GAVGNRWPRQ ETLALLKIRS DMDAAFRDAT LKGPLWEEVS RKLAEEGYRR SAKKCKEKFE 240 NVHKYYKRTK ESRAGRNDGK TYRFFTQLEA LHGTAAGVVA APSPVTSLAP PPATAVGVSG 300 GVRAPAEPPP AVVMGNVMSF STSNTEEYSD EEDSDDEGTE DMGGGGGDER GKRKRLSEGG 360 AAAGGGGGGG GGGGSGKMMR FFEGLVKQVM ERQEAMQQRF LEAIEKREQD RMIREEAWRR 420 QEMARLAREQ EILAQERAMA ASRDAAVVSF IQKITGQTIP MPPIIAAPAI TVMPPPAPSQ 480 PPQPPPPPSH PTPITSVAPA PPPPPPPAAA AAASQPSPQA TKSPLPATPQ TQSSMDIVMT 540 AAEAHDAGYD GSGGGGGQPS SSRWPKAEVH ALIQLRSNLD NRYQEAGPKG PLWEEISAGM 600 RRLGYSRSSK RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYFHQLDALY RNKAALNSSS 660 SAAAAAAPAL PPPEHAEPAV TVAAPISQTP PPPPPQPVTT TKNGNGTSST NGANGEGGGG 720 GSGGMQMQAS NGSVVAGNKF FTGAAAKKPE DIMKEMMEQR PQQPAAANNA FNRTDGGGGG 780 GGVDSDNMDE DDEDDYDDDD DDDDDDVDGN KMQYEIQFQH QHHHQQPPQH RHQQSVVRPN 840 AAASAAAGGN PPGTAAPATA AAATTTTGSF LAMVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 3e-49 | Trihelix family protein |
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Ensembl | ONIVA10G17310.2 |