PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G17310.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 861aa MW: 90087.8 Da PI: 5.9488

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G17310.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	99.2	3.6e-31	172	256	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++rs+k+Ckek+en++k+yk++ke++ +r ++ +t+++f+qlea ONIVA10G17310.1 172 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRSAKKCKEKFENVHKYYKRTKESRAGR--NDGKTYRFFTQLEA 256 8******************************************************************97..56668*****85 PP
2	trihelix	111.1	6.8e-35	549	634	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+++++r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a ONIVA10G17310.1 549 RWPKAEVHALIQLRSNLDNRYQEAGPKGPLWEEISAGMRRLGYSRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 634 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 861 aa Download sequence
MAIYYLEREG LTHNMPMHGH FYTPLPLNHW HADTTNAADM TRGPMRMWDP HVSGVLMRVE 60 MVSGNTRGGG GGGGGSSMQQ QQPGGGGGGV QQFGAVAPEM SPFSPAGGGG GGRISMAEAA 120 SPISSRPPPA QQQFDELGVG GGGGGGGGFD AEALAAAAVG EEGASGGAVG NRWPRQETLA 180 LLKIRSDMDA AFRDATLKGP LWEEVSRKLA EEGYRRSAKK CKEKFENVHK YYKRTKESRA 240 GRNDGKTYRF FTQLEALHGT AAGVVAAPSP VTSLAPPPAT AVGVSGGVRA PAEPPPAVVM 300 GNVMSFSTSN TEEYSDEEDS DDEGTEDMGG GGGDERGKRK RLSEGGAAAG GGGGGGGGGG 360 SGKMMRFFEG LVKQVMERQE AMQQRFLEAI EKREQDRMIR EEAWRRQEMA RLAREQEILA 420 QERAMAASRD AAVVSFIQKI TGQTIPMPPI IAAPAITVMP PPAPSQPPQP PPPPSHPTPI 480 TSVAPAPPPP PPPAAAAAAS QPSPQATKSP LPATPQTQSS MDIVMTAAEA HDAGYDGSGG 540 GGGQPSSSRW PKAEVHALIQ LRSNLDNRYQ EAGPKGPLWE EISAGMRRLG YSRSSKRCKE 600 KWENINKYFK KVKESNKKRP EDSKTCPYFH QLDALYRNKA ALNSSSSAAA AAAPALPPPE 660 HAEPAVTVAA PISQTPPPPP PQPVTTTKNG NGTSSTNGAN GEGGGGGSGG MQMQASNGSV 720 VAGNKFFTGA AAKKPEDIMK EMMEQRPQQP AAANNAFNRT DGGGGGGGVD SDNMDEDDED 780 DYDDDDDDDD DDVDGNKMQY EIQFQHQHHH QQPPQHRHQQ SVVRPNAAAS AAAGGNPPGT 840 AAPATAAAAT TTTGSFLAMV Q

Sequence ? help Back to Top

Protein Sequence Length: 861 aa Download sequence

MAIYYLEREG LTHNMPMHGH FYTPLPLNHW HADTTNAADM TRGPMRMWDP HVSGVLMRVE  60
MVSGNTRGGG GGGGGSSMQQ QQPGGGGGGV QQFGAVAPEM SPFSPAGGGG GGRISMAEAA  120
SPISSRPPPA QQQFDELGVG GGGGGGGGFD AEALAAAAVG EEGASGGAVG NRWPRQETLA  180
LLKIRSDMDA AFRDATLKGP LWEEVSRKLA EEGYRRSAKK CKEKFENVHK YYKRTKESRA  240
GRNDGKTYRF FTQLEALHGT AAGVVAAPSP VTSLAPPPAT AVGVSGGVRA PAEPPPAVVM  300
GNVMSFSTSN TEEYSDEEDS DDEGTEDMGG GGGDERGKRK RLSEGGAAAG GGGGGGGGGG  360
SGKMMRFFEG LVKQVMERQE AMQQRFLEAI EKREQDRMIR EEAWRRQEMA RLAREQEILA  420
QERAMAASRD AAVVSFIQKI TGQTIPMPPI IAAPAITVMP PPAPSQPPQP PPPPSHPTPI  480
TSVAPAPPPP PPPAAAAAAS QPSPQATKSP LPATPQTQSS MDIVMTAAEA HDAGYDGSGG  540
GGGQPSSSRW PKAEVHALIQ LRSNLDNRYQ EAGPKGPLWE EISAGMRRLG YSRSSKRCKE  600
KWENINKYFK KVKESNKKRP EDSKTCPYFH QLDALYRNKA ALNSSSSAAA AAAPALPPPE  660
HAEPAVTVAA PISQTPPPPP PQPVTTTKNG NGTSSTNGAN GEGGGGGSGG MQMQASNGSV  720
VAGNKFFTGA AAKKPEDIMK EMMEQRPQQP AAANNAFNRT DGGGGGGGVD SDNMDEDDED  780
DYDDDDDDDD DDVDGNKMQY EIQFQHQHHH QQPPQHRHQQ SVVRPNAAAS AAAGGNPPGT  840
AAPATAAAAT TTTGSFLAMV Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G17310.1