PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G14690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NF-YC | ||||||||
Protein Properties | Length: 201aa MW: 21334.3 Da PI: 5.2621 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 169.8 | 3.3e-53 | 59 | 162 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdf ONIVA09G14690.1 59 QLQMFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDF 152 89******99999********************************************************************************* PP NF-YC 92 lvdivprdel 101 lvdivprd+ ONIVA09G14690.1 153 LVDIVPRDDA 162 *******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MDPTKSSTPP PVMGAPVGFP PGAYPPPPPA GAAAAAYAQQ LYAPPAAAAA QQAAAAQQQL 60 QMFWAEQYRE IEATTDFKNH NLPLARIKKI MKADEDVRMI AAEAPVVFAR ACEMFILELT 120 HRGWAHAEEN KRRTLQKSDI AAAIARTEVF DFLVDIVPRD DAKDADAAAA AAAAAAAAGI 180 PRPAAGVPAT DPLAYYYVPQ Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 138 | RRTLQKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 3e-57 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G14690.1 |