PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G09830.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 341aa    MW: 35350.6 Da    PI: 7.9201
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G09830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.14.2e-333994458
      ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                     ++Y+eClkNhAaslGgha+DGCgEfmps+ ++ +++++l+CaACgCHRnFHRr +e
  ONIVA09G09830.1 39 TVYRECLKNHAASLGGHALDGCGEFMPSPAANpADPTSLRCAACGCHRNFHRRLPE 94
                     78*****************************99********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEAMDVKYKP LVFPNGAIKK AAKPAAVAPA VGGGGGGETV YRECLKNHAA SLGGHALDGC  60
GEFMPSPAAN PADPTSLRCA ACGCHRNFHR RLPEGSPPPP PPPALLPAPP MPPHRGEETP  120
EVRLPGVDGD ESDSDSDGSE YDDERSVSPP PPPLAAAVAH QAYYPSAPHM LLSLGSSGQA  180
QRLPPQVMSP AAAAAPPPGG GGGGGMPRKR FRTKFTAEQK QRMQELSERL GWRLQKRDEA  240
IVDEWCRDIG VGKGVFKVWM HNNKHNYLGG HSARRSASSA AAAAAPPFNP PTNHTSPPPP  300
PPPHATDFNI NGTATAATAV AAATVAAGNH QENGASSPQS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-27ZF-HD family protein