PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA09G09820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 113aa MW: 11816.1 Da PI: 7.9954 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 93.5 | 1.8e-29 | 19 | 87 | 1 | 60 |
ZF-HD_dimer 1 kekvrYkeClkNhAaslGghavDGCgEfmpsegee.gt........aaalkCaACgCHRnFHRreveee 60 +++vrY eC++NhAas+GghavDGC+Ef+++e+ g+ aaalkCaACgCHR+FHRr +++e ONIVA09G09820.1 19 CCGVRYGECRRNHAASTGGHAVDGCREFIAAEDGGgGNstgavgvaAAALKCAACGCHRSFHRRVQVYE 87 5789***************************888855599*****99*****************99876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 113 aa Download sequence |
MMKRLVVLRR REPAVRFSCC GVRYGECRRN HAASTGGHAV DGCREFIAAE DGGGGNSTGA 60 VGVAAAALKC AACGCHRSFH RRVQVYEVAW DDDCASGDTS SSSPSSSSSL SSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28917.1 | 6e-12 | ZF-HD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA09G09820.1 |