PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G06790.4

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 1298aa MW: 147113 Da PI: 5.5569

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G06790.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.6	2.2e-20	25	119	1	86
trihelix 1 rWtkqevlaLiearremeerlr...rgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Lie++ +e r + r + + +++W++v++++r++g+er+ qC+++w+nl+++y ki+++e++ + + p ONIVA09G06790.4 25 RWTRQEILVLIEGKHAVEGRGSgmgR-AaaasygeaaaALETKWAAVAEFCRRHGVERGTAQCRKRWSNLARDYNKIERWERGAAGGW---EPS 114 8************99999884332.03455555655889***************************************864333...366 PP trihelix 82 fdqle 86 f +++ ONIVA09G06790.4 115 FWDMH 119 66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1298 aa Download sequence
MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA 60 AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN 120 DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAP EELMFSDDEE EPPPPPVNPA 180 GSTVEEEEVE DTEVFDSGRP AAEESLFSDD EEEDWVFQDD EEEEAPPVTA AASASPAQAP 240 HGQLIALPIS EKSEASRHQR TEQRESFSSM EPLSYTTPEM KMETDAVQLN CDWPMQTLQG 300 HGSSEPSEKS AVQQSDDTNS RLHRDKQWAV QDKRLVLQRT LTEMHTFIKH AEWWFHKDVF 360 AQLLQDAKDA VNCAEDLLDE INYHEFQNKV EGHAVLFHVQ DYHETKIDKI QRKLEHLVRQ 420 MEQLGLYDER QQLIIESISR EDNLFAEEQT IFGRQKEMSE LIELIVLQEN SPTDKQVTEV 480 HAVPDCKRAK LENVSVLPIV GSGGVGKTTL ANLVFNERSV RDHFDLLIWI CVSDGFDEKK 540 LMKRLAWSVA ENEMKTDDLG CLQRILTNGI IHHTRRVLLV LDDVQTDACR EDCHGWKNFL 600 APLKYARSGS MVLVTTRYHR VAERVGTLKH MFLEGLPEET IWEFFRMLTF GSRNSNSNAV 660 LEPIGRSIVA RLDGSSLGIK IIGRLLSLKL DAKYWKIILE SELWGWPHQE EASIFTALQL 720 SYQYLPFHLK RCFSFCSLYP RGYEFDAETL VDSWVAVGFV MPSRSILAVD IGHVYFNQLV 780 SRSFFQRSPT SSRYVIHDLL HDMAQYVARN DCFIIKSRCG MSRIPPKVRH VSILGNGELS 840 STDIECLNTY KTLRSIVCIG VGCDIITNSV LETWFDHLTR IRMLRFISCR LKELPCNVGK 900 LIHLRYLDIS ACDFDKLPTD LFCRLYKLEI LDAQNCTLHA VPKDIIKLVN LQRLRLKDDL 960 ISQLGRVPEV GKLTLLQNMP YYAVDDKPGR GIQELKNMNH LHGGLEIDGL RNVTSREEVA 1020 GAELAKKIYF DTLVLKWHES IRPQKHNSTK EMEVLEALRP SSNIKHLEVK FYMGDGLSPM 1080 WLRHDELSSL ASLSINSCPN TTTLFLIEPS ETGSSRSSSV SFQSLTKLSI TWCRSLTSLD 1140 NFLQPECLPM IKVIQISNCE ELASLPTNNL VHFVHLEDLE ICHCWNLNWE PGLALPPSLK 1200 SLKLEACGEF SDSTLSCLHN LTALTILNLR FCPSIESISA QIWSGLWSIE NLKIVCCQGL 1260 VTVGGSESIA GIKNVDIRHC SKLQDLEQPF RSGQADSQ

Sequence ? help Back to Top

Protein Sequence Length: 1298 aa Download sequence

MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA  60
AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN  120
DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAP EELMFSDDEE EPPPPPVNPA  180
GSTVEEEEVE DTEVFDSGRP AAEESLFSDD EEEDWVFQDD EEEEAPPVTA AASASPAQAP  240
HGQLIALPIS EKSEASRHQR TEQRESFSSM EPLSYTTPEM KMETDAVQLN CDWPMQTLQG  300
HGSSEPSEKS AVQQSDDTNS RLHRDKQWAV QDKRLVLQRT LTEMHTFIKH AEWWFHKDVF  360
AQLLQDAKDA VNCAEDLLDE INYHEFQNKV EGHAVLFHVQ DYHETKIDKI QRKLEHLVRQ  420
MEQLGLYDER QQLIIESISR EDNLFAEEQT IFGRQKEMSE LIELIVLQEN SPTDKQVTEV  480
HAVPDCKRAK LENVSVLPIV GSGGVGKTTL ANLVFNERSV RDHFDLLIWI CVSDGFDEKK  540
LMKRLAWSVA ENEMKTDDLG CLQRILTNGI IHHTRRVLLV LDDVQTDACR EDCHGWKNFL  600
APLKYARSGS MVLVTTRYHR VAERVGTLKH MFLEGLPEET IWEFFRMLTF GSRNSNSNAV  660
LEPIGRSIVA RLDGSSLGIK IIGRLLSLKL DAKYWKIILE SELWGWPHQE EASIFTALQL  720
SYQYLPFHLK RCFSFCSLYP RGYEFDAETL VDSWVAVGFV MPSRSILAVD IGHVYFNQLV  780
SRSFFQRSPT SSRYVIHDLL HDMAQYVARN DCFIIKSRCG MSRIPPKVRH VSILGNGELS  840
STDIECLNTY KTLRSIVCIG VGCDIITNSV LETWFDHLTR IRMLRFISCR LKELPCNVGK  900
LIHLRYLDIS ACDFDKLPTD LFCRLYKLEI LDAQNCTLHA VPKDIIKLVN LQRLRLKDDL  960
ISQLGRVPEV GKLTLLQNMP YYAVDDKPGR GIQELKNMNH LHGGLEIDGL RNVTSREEVA  1020
GAELAKKIYF DTLVLKWHES IRPQKHNSTK EMEVLEALRP SSNIKHLEVK FYMGDGLSPM  1080
WLRHDELSSL ASLSINSCPN TTTLFLIEPS ETGSSRSSSV SFQSLTKLSI TWCRSLTSLD  1140
NFLQPECLPM IKVIQISNCE ELASLPTNNL VHFVHLEDLE ICHCWNLNWE PGLALPPSLK  1200
SLKLEACGEF SDSTLSCLHN LTALTILNLR FCPSIESISA QIWSGLWSIE NLKIVCCQGL  1260
VTVGGSESIA GIKNVDIRHC SKLQDLEQPF RSGQADSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-31	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G06790.4