PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G06790.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 1256aa MW: 142531 Da PI: 6.1975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G06790.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.6	2.1e-20	25	119	1	86
trihelix 1 rWtkqevlaLiearremeerlr...rgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Lie++ +e r + r + + +++W++v++++r++g+er+ qC+++w+nl+++y ki+++e++ + + p ONIVA09G06790.3 25 RWTRQEILVLIEGKHAVEGRGSgmgR-AaaasygeaaaALETKWAAVAEFCRRHGVERGTAQCRKRWSNLARDYNKIERWERGAAGGW---EPS 114 8************99999884332.03455555655889***************************************864333...366 PP trihelix 82 fdqle 86 f +++ ONIVA09G06790.3 115 FWDMH 119 66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1256 aa Download sequence
MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA 60 AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN 120 DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAA EESLFSDDEE EDWVFQDDEE 180 EEAPPVTAAA SASPAQAPHG QLIALPISEK SEASRHQRTE QRESFSSMEP LSYTTPEMKM 240 ETDAVQLNCD WPMQTLQGHG SSEPSEKSAV QQSDDTNSRL HRDKQWAVQD KRLVLQRTLT 300 EMHTFIKHAE WWFHKDVFAQ LLQDAKDAVN CAEDLLDEIN YHEFQNKVEG HAVLFHVQDY 360 HETKIDKIQR KLEHLVRQME QLGLYDERQQ LIIESISRED NLFAEEQTIF GRQKEMSELI 420 ELIVLQENSP TDKQVTEVHA VPDCKRAKLE NVSVLPIVGS GGVGKTTLAN LVFNERSVRD 480 HFDLLIWICV SDGFDEKKLM KRLAWSVAEN EMKTDDLGCL QRILTNGIIH HTRRVLLVLD 540 DVQTDACRED CHGWKNFLAP LKYARSGSMV LVTTRYHRVA ERVGTLKHMF LEGLPEETIW 600 EFFRMLTFGS RNSNSNAVLE PIGRSIVARL DGSSLGIKII GRLLSLKLDA KYWKIILESE 660 LWGWPHQEEA SIFTALQLSY QYLPFHLKRC FSFCSLYPRG YEFDAETLVD SWVAVGFVMP 720 SRSILAVDIG HVYFNQLVSR SFFQRSPTSS RYVIHDLLHD MAQYVARNDC FIIKSRCGMS 780 RIPPKVRHVS ILGNGELSST DIECLNTYKT LRSIVCIGVG CDIITNSVLE TWFDHLTRIR 840 MLRFISCRLK ELPCNVGKLI HLRYLDISAC DFDKLPTDLF CRLYKLEILD AQNCTLHAVP 900 KDIIKLVNLQ RLRLKDDLIS QLGRVPEVGK LTLLQNMPYY AVDDKPGRGI QELKNMNHLH 960 GGLEIDGLRN VTSREEVAGA ELAKKIYFDT LVLKWHESIR PQKHNSTKEM EVLEALRPSS 1020 NIKHLEVKFY MGDGLSPMWL RHDELSSLAS LSINSCPNTT TLFLIEPSET GSSRSSSVSF 1080 QSLTKLSITW CRSLTSLDNF LQPECLPMIK VIQISNCEEL ASLPTNNLVH FVHLEDLEIC 1140 HCWNLNWEPG LALPPSLKSL KLEACGEFSD STLSCLHNLT ALTILNLRFC PSIESISAQI 1200 WSGLWSIENL KIVCCQGLVT VGGSESIAGI KNVDIRHCSK LQDLEQPFRS GQADSQ

Sequence ? help Back to Top

Protein Sequence Length: 1256 aa Download sequence

MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA  60
AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN  120
DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAA EESLFSDDEE EDWVFQDDEE  180
EEAPPVTAAA SASPAQAPHG QLIALPISEK SEASRHQRTE QRESFSSMEP LSYTTPEMKM  240
ETDAVQLNCD WPMQTLQGHG SSEPSEKSAV QQSDDTNSRL HRDKQWAVQD KRLVLQRTLT  300
EMHTFIKHAE WWFHKDVFAQ LLQDAKDAVN CAEDLLDEIN YHEFQNKVEG HAVLFHVQDY  360
HETKIDKIQR KLEHLVRQME QLGLYDERQQ LIIESISRED NLFAEEQTIF GRQKEMSELI  420
ELIVLQENSP TDKQVTEVHA VPDCKRAKLE NVSVLPIVGS GGVGKTTLAN LVFNERSVRD  480
HFDLLIWICV SDGFDEKKLM KRLAWSVAEN EMKTDDLGCL QRILTNGIIH HTRRVLLVLD  540
DVQTDACRED CHGWKNFLAP LKYARSGSMV LVTTRYHRVA ERVGTLKHMF LEGLPEETIW  600
EFFRMLTFGS RNSNSNAVLE PIGRSIVARL DGSSLGIKII GRLLSLKLDA KYWKIILESE  660
LWGWPHQEEA SIFTALQLSY QYLPFHLKRC FSFCSLYPRG YEFDAETLVD SWVAVGFVMP  720
SRSILAVDIG HVYFNQLVSR SFFQRSPTSS RYVIHDLLHD MAQYVARNDC FIIKSRCGMS  780
RIPPKVRHVS ILGNGELSST DIECLNTYKT LRSIVCIGVG CDIITNSVLE TWFDHLTRIR  840
MLRFISCRLK ELPCNVGKLI HLRYLDISAC DFDKLPTDLF CRLYKLEILD AQNCTLHAVP  900
KDIIKLVNLQ RLRLKDDLIS QLGRVPEVGK LTLLQNMPYY AVDDKPGRGI QELKNMNHLH  960
GGLEIDGLRN VTSREEVAGA ELAKKIYFDT LVLKWHESIR PQKHNSTKEM EVLEALRPSS  1020
NIKHLEVKFY MGDGLSPMWL RHDELSSLAS LSINSCPNTT TLFLIEPSET GSSRSSSVSF  1080
QSLTKLSITW CRSLTSLDNF LQPECLPMIK VIQISNCEEL ASLPTNNLVH FVHLEDLEIC  1140
HCWNLNWEPG LALPPSLKSL KLEACGEFSD STLSCLHNLT ALTILNLRFC PSIESISAQI  1200
WSGLWSIENL KIVCCQGLVT VGGSESIAGI KNVDIRHCSK LQDLEQPFRS GQADSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	5e-32	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G06790.3