PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G06790.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 1226aa MW: 139397 Da PI: 6.1255

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G06790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.1	6.1e-15	32	89	26	86
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 + +++W++v++++r++g+er+ qC+++w+nl+++y ki+++e++ + + p f +++ ONIVA09G06790.2 32 ALETKWAAVAEFCRRHGVERGTAQCRKRWSNLARDYNKIERWERGAAGGW---EPSFWDMH 89 5589****************************************864333...36666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1226 aa Download sequence
MSGDPAGAAN AAAAASAAKP PRLPRYGEAA AALETKWAAV AEFCRRHGVE RGTAQCRKRW 60 SNLARDYNKI ERWERGAAGG WEPSFWDMHN DARREMRLPG FFDREVYDIL DSRRLAFVNE 120 MVFDSGRPAA EESLFSDDEE EDWVFQDDEE EEAPPVTAAA SASPAQAPHG QLIALPISEK 180 SEASRHQRTE QRESFSSMEP LSYTTPEMKM ETDAVQLNCD WPMQTLQGHG SSEPSEKSAV 240 QQSDDTNSRL HRDKQWAVQD KRLVLQRTLT EMHTFIKHAE WWFHKDVFAQ LLQDAKDAVN 300 CAEDLLDEIN YHEFQNKVEG HAVLFHVQDY HETKIDKIQR KLEHLVRQME QLGLYDERQQ 360 LIIESISRED NLFAEEQTIF GRQKEMSELI ELIVLQENSP TDKQVTEVHA VPDCKRAKLE 420 NVSVLPIVGS GGVGKTTLAN LVFNERSVRD HFDLLIWICV SDGFDEKKLM KRLAWSVAEN 480 EMKTDDLGCL QRILTNGIIH HTRRVLLVLD DVQTDACRED CHGWKNFLAP LKYARSGSMV 540 LVTTRYHRVA ERVGTLKHMF LEGLPEETIW EFFRMLTFGS RNSNSNAVLE PIGRSIVARL 600 DGSSLGIKII GRLLSLKLDA KYWKIILESE LWGWPHQEEA SIFTALQLSY QYLPFHLKRC 660 FSFCSLYPRG YEFDAETLVD SWVAVGFVMP SRSILAVDIG HVYFNQLVSR SFFQRSPTSS 720 RYVIHDLLHD MAQYVARNDC FIIKSRCGMS RIPPKVRHVS ILGNGELSST DIECLNTYKT 780 LRSIVCIGVG CDIITNSVLE TWFDHLTRIR MLRFISCRLK ELPCNVGKLI HLRYLDISAC 840 DFDKLPTDLF CRLYKLEILD AQNCTLHAVP KDIIKLVNLQ RLRLKDDLIS QLGRVPEVGK 900 LTLLQNMPYY AVDDKPGRGI QELKNMNHLH GGLEIDGLRN VTSREEVAGA ELAKKIYFDT 960 LVLKWHESIR PQKHNSTKEM EVLEALRPSS NIKHLEVKFY MGDGLSPMWL RHDELSSLAS 1020 LSINSCPNTT TLFLIEPSET GSSRSSSVSF QSLTKLSITW CRSLTSLDNF LQPECLPMIK 1080 VIQISNCEEL ASLPTNNLVH FVHLEDLEIC HCWNLNWEPG LALPPSLKSL KLEACGEFSD 1140 STLSCLHNLT ALTILNLRFC PSIESISAQI WSGLWSIENL KIVCCQGLVT VGGSESIAGI 1200 KNVDIRHCSK LQDLEQPFRS GQADSQ

Sequence ? help Back to Top

Protein Sequence Length: 1226 aa Download sequence

MSGDPAGAAN AAAAASAAKP PRLPRYGEAA AALETKWAAV AEFCRRHGVE RGTAQCRKRW  60
SNLARDYNKI ERWERGAAGG WEPSFWDMHN DARREMRLPG FFDREVYDIL DSRRLAFVNE  120
MVFDSGRPAA EESLFSDDEE EDWVFQDDEE EEAPPVTAAA SASPAQAPHG QLIALPISEK  180
SEASRHQRTE QRESFSSMEP LSYTTPEMKM ETDAVQLNCD WPMQTLQGHG SSEPSEKSAV  240
QQSDDTNSRL HRDKQWAVQD KRLVLQRTLT EMHTFIKHAE WWFHKDVFAQ LLQDAKDAVN  300
CAEDLLDEIN YHEFQNKVEG HAVLFHVQDY HETKIDKIQR KLEHLVRQME QLGLYDERQQ  360
LIIESISRED NLFAEEQTIF GRQKEMSELI ELIVLQENSP TDKQVTEVHA VPDCKRAKLE  420
NVSVLPIVGS GGVGKTTLAN LVFNERSVRD HFDLLIWICV SDGFDEKKLM KRLAWSVAEN  480
EMKTDDLGCL QRILTNGIIH HTRRVLLVLD DVQTDACRED CHGWKNFLAP LKYARSGSMV  540
LVTTRYHRVA ERVGTLKHMF LEGLPEETIW EFFRMLTFGS RNSNSNAVLE PIGRSIVARL  600
DGSSLGIKII GRLLSLKLDA KYWKIILESE LWGWPHQEEA SIFTALQLSY QYLPFHLKRC  660
FSFCSLYPRG YEFDAETLVD SWVAVGFVMP SRSILAVDIG HVYFNQLVSR SFFQRSPTSS  720
RYVIHDLLHD MAQYVARNDC FIIKSRCGMS RIPPKVRHVS ILGNGELSST DIECLNTYKT  780
LRSIVCIGVG CDIITNSVLE TWFDHLTRIR MLRFISCRLK ELPCNVGKLI HLRYLDISAC  840
DFDKLPTDLF CRLYKLEILD AQNCTLHAVP KDIIKLVNLQ RLRLKDDLIS QLGRVPEVGK  900
LTLLQNMPYY AVDDKPGRGI QELKNMNHLH GGLEIDGLRN VTSREEVAGA ELAKKIYFDT  960
LVLKWHESIR PQKHNSTKEM EVLEALRPSS NIKHLEVKFY MGDGLSPMWL RHDELSSLAS  1020
LSINSCPNTT TLFLIEPSET GSSRSSSVSF QSLTKLSITW CRSLTSLDNF LQPECLPMIK  1080
VIQISNCEEL ASLPTNNLVH FVHLEDLEIC HCWNLNWEPG LALPPSLKSL KLEACGEFSD  1140
STLSCLHNLT ALTILNLRFC PSIESISAQI WSGLWSIENL KIVCCQGLVT VGGSESIAGI  1200
KNVDIRHCSK LQDLEQPFRS GQADSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	8e-25	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G06790.2