PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G06790.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Trihelix

Protein Properties

Length: 1212aa MW: 137271 Da PI: 5.3313

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G06790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.7	2e-20	25	119	1	86
trihelix 1 rWtkqevlaLiearremeerlr...rgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Lie++ +e r + r + + +++W++v++++r++g+er+ qC+++w+nl+++y ki+++e++ + + p ONIVA09G06790.1 25 RWTRQEILVLIEGKHAVEGRGSgmgR-AaaasygeaaaALETKWAAVAEFCRRHGVERGTAQCRKRWSNLARDYNKIERWERGAAGGW---EPS 114 8************99999884332.03455555655889***************************************864333...366 PP trihelix 82 fdqle 86 f +++ ONIVA09G06790.1 115 FWDMH 119 66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1212 aa Download sequence
MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA 60 AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN 120 DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAP EELMFSDDEE EPPPPPVNPA 180 GSTVEEEEVE DTEVFDSGRP AAEESLFSDD EEEDWVFQDD EEEEAPPVTA AASASPAQAP 240 HGQLIALPIS EKSEASRHQR TEQRESFSSM EPLSYTTPEM KMETDAVQLN CDWPMQTLQG 300 HGSSEPSEKS AVQQSDDTNS RLHRDKQWAV QDKRLVLQRT LTEMHTFIKH AEWWFHKDVF 360 AQLLQDAKDA VNCAEDLLDE INYHEFQNKV EGHAVLFHVQ DYHETKIDKI QRKLEHLVRQ 420 MEQLGLYDER QQLIIESISR EDNLFAEEQT IFGRQKEMSE LIELIVLQEN SPTDKQVTEV 480 HAVPDCKRAK LENVSVLPIV GSGGVGKTTL ANLVFNERSV RDHFDLLIWI CVSDGFDEKK 540 LMKRLAWSVA ENEMKTDDLG CLQRILTNGI IHHTRRVLLV LDDVQTDACR EDCHGWKNFL 600 APLKYARSGS MVLVTTRYHR VAERVGTLKH MFLEGLPEET IWEFFRMLTF GSRNSNSNAV 660 LEPIGRSIVA RLDGSSLGIK IIGRLLSLKL DAKYWKIILE SELWGWPHQE EASIFTALQL 720 SYQYLPFHLK RCFSFCSLYP RGYEFDAETL VDSWVAVGFV MPSRSILAVD IGHVYFNQLY 780 VARNDCFIIK SRCGMSRIPP KVRHVSILGN GELSSTDIEC LNTYKTLRSI VCIGVGCDII 840 TNSVLETWFD HLTRIRMLRF ISCRLKELPC NVGKLIHLRY LDISACDFDK LPTDLFCRLY 900 KLEILDAQNC TLHAVPKDII KLVNLQRLRL KDDLISQLGR VPEELKNMNH LHGGLEIDGL 960 RNVTSREEVA GAELAKKIYF DTLVLKWHES IRPQKHNSTK EMEVLEALRP SSNIKHLEVK 1020 FYMGDGLSPM WLRHDELSSL ASLSINSCPN TTTLFLIEPS ETGSSRSSSI SNCEELASLP 1080 TNNLVHFVHL EDLEICHCWN LNWEPGLALP PSLKSLKLEA CGEFSDSTLS CLHNLTALTI 1140 LNLRFCPSIE SISAQIWSGL WSIENLKIVC CQGLVTVGGS ESIAGIKNVD IRHCSKLQDL 1200 EQPFRSGQAD SQ

Sequence ? help Back to Top

Protein Sequence Length: 1212 aa Download sequence

MSGDPAGAAN AAAAASAAKP PRLPRWTRQE ILVLIEGKHA VEGRGSGMGR AAAASYGEAA  60
AALETKWAAV AEFCRRHGVE RGTAQCRKRW SNLARDYNKI ERWERGAAGG WEPSFWDMHN  120
DARREMRLPG FFDREVYDIL DSRRLAFVNE MVFDSGRPAP EELMFSDDEE EPPPPPVNPA  180
GSTVEEEEVE DTEVFDSGRP AAEESLFSDD EEEDWVFQDD EEEEAPPVTA AASASPAQAP  240
HGQLIALPIS EKSEASRHQR TEQRESFSSM EPLSYTTPEM KMETDAVQLN CDWPMQTLQG  300
HGSSEPSEKS AVQQSDDTNS RLHRDKQWAV QDKRLVLQRT LTEMHTFIKH AEWWFHKDVF  360
AQLLQDAKDA VNCAEDLLDE INYHEFQNKV EGHAVLFHVQ DYHETKIDKI QRKLEHLVRQ  420
MEQLGLYDER QQLIIESISR EDNLFAEEQT IFGRQKEMSE LIELIVLQEN SPTDKQVTEV  480
HAVPDCKRAK LENVSVLPIV GSGGVGKTTL ANLVFNERSV RDHFDLLIWI CVSDGFDEKK  540
LMKRLAWSVA ENEMKTDDLG CLQRILTNGI IHHTRRVLLV LDDVQTDACR EDCHGWKNFL  600
APLKYARSGS MVLVTTRYHR VAERVGTLKH MFLEGLPEET IWEFFRMLTF GSRNSNSNAV  660
LEPIGRSIVA RLDGSSLGIK IIGRLLSLKL DAKYWKIILE SELWGWPHQE EASIFTALQL  720
SYQYLPFHLK RCFSFCSLYP RGYEFDAETL VDSWVAVGFV MPSRSILAVD IGHVYFNQLY  780
VARNDCFIIK SRCGMSRIPP KVRHVSILGN GELSSTDIEC LNTYKTLRSI VCIGVGCDII  840
TNSVLETWFD HLTRIRMLRF ISCRLKELPC NVGKLIHLRY LDISACDFDK LPTDLFCRLY  900
KLEILDAQNC TLHAVPKDII KLVNLQRLRL KDDLISQLGR VPEELKNMNH LHGGLEIDGL  960
RNVTSREEVA GAELAKKIYF DTLVLKWHES IRPQKHNSTK EMEVLEALRP SSNIKHLEVK  1020
FYMGDGLSPM WLRHDELSSL ASLSINSCPN TTTLFLIEPS ETGSSRSSSI SNCEELASLP  1080
TNNLVHFVHL EDLEICHCWN LNWEPGLALP PSLKSLKLEA CGEFSDSTLS CLHNLTALTI  1140
LNLRFCPSIE SISAQIWSGL WSIENLKIVC CQGLVTVGGS ESIAGIKNVD IRHCSKLQDL  1200
EQPFRSGQAD SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-31	Trihelix family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G06790.1