PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G20290.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 292aa    MW: 29913.4 Da    PI: 7.0575
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G20290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.52.8e-3263117459
      ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                      +rY+eClkNhA+ +GghavDGCgEfm++ geeg+++al+CaACgCHRnFHR+e+e+
  ONIVA08G20290.1  63 ARYRECLKNHAVGIGGHAVDGCGEFMAA-GEEGSIDALRCAACGCHRNFHRKESES 117
                      79*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDFDDHDEGD GDEEMPPMPL SSGYDAPMQP GLVGGGGGVP KPGGGVGGGG GGGGGGGGGG  60
GGARYRECLK NHAVGIGGHA VDGCGEFMAA GEEGSIDALR CAACGCHRNF HRKESESPTA  120
VGPAEPSAVS PAAISAYGAS PHHQFSPYYR TPAGYLHHQQ HQMAAAAAAA AAAAAGGYPQ  180
RPLALPSTSH SGRDEGDDMS GMVGPMVIGP MVGMSLGSAG PSGSGSGKKR FRTKFTQEQK  240
DKMLAFAERL GWRIQKHDEA AVQQFCEEVC VKRHVLKVWM HNNKHTLGKK AP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-59ZF-HD family protein