PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G17190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 362aa    MW: 37177.6 Da    PI: 7.6955
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G17190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.95e-333692358
      ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                     +++Y+eClkNhAaslGghavDGCgEfmps+ ++ +++a+lkCaACgCHRnFHRr +e
  ONIVA08G17190.1 36 AAVYRECLKNHAASLGGHAVDGCGEFMPSPAADaADPASLKCAACGCHRNFHRRLPE 92
                     679***************************99999******************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MEAVVGVKYR PVVFPNGGAA AAAAGKSKAT PASATAAVYR ECLKNHAASL GGHAVDGCGE  60
FMPSPAADAA DPASLKCAAC GCHRNFHRRL PEAPPSPPLL ALPPPPPPPP PPPPPPQPQQ  120
HLPRTAAVAV AVAPQLLLHG SHQRHEQSPE TDRVRGPGHH HDDDAAADDD DSEDSEMSDY  180
DDDRSASPLQ APPPVLSPGY LPSATHMLLS LGSASAPAVA ASRPHAAAAA MGPPPPPGAA  240
TSASRKRFRT KFSPEQKQRM QALSERLGWR LQKRDEAVVD ECCREIGVGK GVFKVWMHNN  300
KHNFLGGHSA RRSAAAAAAA APLAPPPVLT DFSINGSSTH AAAADHAAAT ASGGGGGSPQ  360
ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-22ZF-HD family protein