PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA08G17170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 251aa MW: 27192.6 Da PI: 8.4439 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94 | 1.2e-29 | 158 | 213 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +vrY eC++NhAa++GghavDGC+Ef+++ geegt al+CaACgCHR+FHRr v+ ONIVA08G17170.1 158 GRVRYGECRRNHAARMGGHAVDGCREFLAE-GEEGTGGALRCAACGCHRSFHRRVVV 213 579**************************8.999********************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRFLSYAWA IIWASISWIG GPLDTGLVVW WRYREEIGQS EDATRDGNCA RLPVYPRAGG 60 TQDSAKRTAS RSHHVAAVSL QRRLGEQREQ EYVARATRGH RDALQRDRQI TECDESGRSG 120 SINAMMKRMV ILRRCEPPPP PPPQPAAAVV AAMGGCCGRV RYGECRRNHA ARMGGHAVDG 180 CREFLAEGEE GTGGALRCAA CGCHRSFHRR VVVVQQCCAC DTAAAAAAAG GWEWRDCSPE 240 SSSSASSTTA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74660.1 | 2e-18 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA08G17170.1 |