PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G04140.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family AP2
Protein Properties Length: 273aa    MW: 29540.8 Da    PI: 6.6917
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G04140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.74.3e-1177133155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GV++ k++g+++A+++d  s+  g krk  + g++ t+e Aa+a++ a++k++g
  ONIVA08G04140.1  77 SRYHGVTRLKWSGKFEAHLWDnSSQvEGrKRKGKH-GSYVTEENAARAHDLAALKYWG 133
                      79*******************55558777778888.999999**************98 PP

2AP250.16.7e-16178232156
              AP2   1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      s y+GV+++k +grW A+I    e +    k ++lg+f t+ eAa+a++ a+ +l+g+
  ONIVA08G04140.1 178 SSYRGVTRRK-DGRWQARIGRIGEsR--DtKDIYLGTFETEIEAAEAYDLAAIELRGA 232
                      67*****999.9******99953323..36**********99*************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MATVQPAASD PAPPPPPETE EQPAAAGGEE IAALDEQLAV ADGGGDDGKA AAAAEGGGGG  60
GKLVAETMRK YAAPRSSRYH GVTRLKWSGK FEAHLWDNSS QVEGRKRKGK HGSYVTEENA  120
ARAHDLAALK YWGAGPNTKL NFNVSDYEKE IERMKTMSQD EFVVYIRRQS SCFSRGTSSY  180
RGVTRRKDGR WQARIGRIGE SRDTKDIYLG TFETEIEAAE AYDLAAIELR GAHAVTNFDI  240
SNYCEDGLKK LEASSEVPKL LEGPSKAAKL AGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-66AP2 family protein