PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G26430.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WOX

Protein Properties

Length: 262aa MW: 27587.8 Da PI: 8.4515

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G26430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	2e-15	20	80	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ ONIVA07G26430.1 20 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 80 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.1e-35	19	82	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q ONIVA07G26430.1 19 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 82 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MDGGHSPDRH AAAAAGEPVR SRWTPKPEQI LILESIFNSG MVNPPKDETV RIRKLLERFG 60 AVGDANVFYW FQNRRSRSRR RQRQLQAQAQ AAAAAASSGS PPTASSGGLA PGHAGSPASS 120 LGMFAHGAAG YSSSSSSSWP SSPPSVGMMM GDVDYGGGGD DLFAISRQMG YMDGGGGSSS 180 SAAAGQHQQQ QLYYSCQPAT MTVFINGVAT EVPRGPIDLR SMFGQDVMLV HSTGALLPAN 240 EYGILLHSLQ MGESYFLVTR SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	2e-36	WOX family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G26430.1