PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G15480.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Dof
Protein Properties Length: 359aa    MW: 34259.9 Da    PI: 8.0653
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G15480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.7e-3946105362
           zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s+
  ONIVA07G15480.1  46 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRSR 105
                      57899****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MAGAGGAATA AAGGGGGGGV AAGRSGGGGG GGAAAAAGAG APDPRAEALR CPRCDSANTK  60
FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NKRSRSGGAA PGGGVGRGGP  120
GGGAAAAVSS AGGGAAGTSP ASSLALPQPG SLPSLSSALG LTGGTSLASL LLGSGGSGGD  180
HLGLFQAMQS VVSDAAAFEM HQQHQSQVDH LLGLGYGAAG AQIQAAKPWL HDGGATGGLL  240
DGFYAPLLSG SIVPGLEELQ VKAEATTGDH QQKSSAAAAG EQSWDLPTPS SSNVEASIIA  300
SDALMAAAAA SMNPAVSAAA ASTAPSAQSL LYWGNGGIGA AAAAWPDLAN CGSSIATLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.17e-34Dof family protein