PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G14170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | SBP | ||||||||
Protein Properties | Length: 216aa MW: 22044.3 Da PI: 10.8356 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.7 | 2.5e-41 | 109 | 186 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dlsea +y+rrhkvC++hsk pvvlv+gl+qrfCqqCsrfhel+efD++krsCrrrLa+hnerrrk++a ONIVA07G14170.1 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGHNERRRKSAA 186 6**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MDRKDKARKN FSSSSSSSAA SMAALAAAAA AGDGGAALPS PMEEDKKPRL VASSLAPVAG 60 GGGGGSSSSA AVAAGASSSS SSSSVAAAAR RGAGRAGGGA PSGGGGGPRC QVERCGVDLS 120 EAGRYNRRHK VCQTHSKEPV VLVAGLRQRF CQQCSRFHEL TEFDDAKRSC RRRLAGHNER 180 RRKSAADTAH GENCRHADQD AGRSHQGTGN PPFQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 2e-37 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G14170.1 |